scholarly journals Alternative model organisms for toxicological fingerprinting of relevant parameters in food and nutrition

Author(s):  
Georg Sandner ◽  
Alice König ◽  
Melanie Wallner ◽  
Julian Weghuber
2020 ◽  
Author(s):  
John Lee ◽  
Manthan Shah ◽  
Sara Ballouz ◽  
Megan Crow ◽  
Jesse Gillis

ABSTRACTCo-expression analysis has provided insight into gene function in organisms from Arabidopsis to Zebrafish. Comparison across species has the potential to enrich these results, for example by prioritizing among candidate human disease genes based on their network properties, or by finding alternative model systems where their co-expression is conserved. Here, we present CoCoCoNet as a tool for identifying conserved gene modules and comparing co-expression networks. CoCoCoNet is a resource for both data and methods, providing gold-standard networks and sophisticated tools for on-the-fly comparative analyses across 14 species. We show how CoCoCoNet can be used in two use cases. In the first, we demonstrate deep conservation of a nucleolus gene module across very divergent organisms, and in the second, we show how the heterogeneity of autism mechanisms in humans can be broken down by functional groups, and translated to model organisms. CoCoCoNet is free to use and available to all at https://milton.cshl.edu/CoCoCoNet, with data and R scripts available at ftp://milton.cshl.edu/data.


2018 ◽  
pp. 110-123
Author(s):  
Anbazhagan Murugadas ◽  
Mohammed Zeeshan ◽  
Mohammad A. Akbarsha

2003 ◽  
Vol 4 (10) ◽  
pp. 798-807 ◽  
Author(s):  
Pierre Golstein ◽  
Laurence Aubry ◽  
Jean-Pierre Levraud

On behalf of the Board, I am delighted to announce the launch of the inaugural issue of the first journal dedicated to the North African countries and Mediterranean region "The North African Journal of Food and Nutrition Research (NAJFNR) ". A new open access and international peer-reviewed journal, which publishes original (not previously published) work of exceptional quality and interest and which intends to give a wide-ranging coverage of research, views, and reviews on nutrition and its effects in relation to human health and disease. The NAJFNR will include all nutrition field research in humans and various disease model organisms and will be of interest to the basic researcher as well as to physician scientists and clinicians.


2020 ◽  
Vol 48 (W1) ◽  
pp. W566-W571 ◽  
Author(s):  
John Lee ◽  
Manthan Shah ◽  
Sara Ballouz ◽  
Megan Crow ◽  
Jesse Gillis

Abstract Co-expression analysis has provided insight into gene function in organisms from Arabidopsis to zebrafish. Comparison across species has the potential to enrich these results, for example by prioritizing among candidate human disease genes based on their network properties or by finding alternative model systems where their co-expression is conserved. Here, we present CoCoCoNet as a tool for identifying conserved gene modules and comparing co-expression networks. CoCoCoNet is a resource for both data and methods, providing gold standard networks and sophisticated tools for on-the-fly comparative analyses across 14 species. We show how CoCoCoNet can be used in two use cases. In the first, we demonstrate deep conservation of a nucleolus gene module across very divergent organisms, and in the second, we show how the heterogeneity of autism mechanisms in humans can be broken down by functional groups and translated to model organisms. CoCoCoNet is free to use and available to all at https://milton.cshl.edu/CoCoCoNet, with data and R scripts available at ftp://milton.cshl.edu/data.


Author(s):  
Meghit Boumediene Khaled

On behalf of the Board, I am delighted to announce the launch of the inaugural issue of the first journal dedicated to the North African countries and Mediterranean region "The North African Journal of Food and Nutrition Research (NAJFNR) ". A new open access and international peer-reviewed journal, which publishes original (not previously published) work of exceptional quality and interest and which intends to give a wide-ranging coverage of research, views, and reviews on nutrition and its effects in relation to human health and disease. The NAJFNR will include all nutrition field research in humans and various disease model organisms and will be of interest to the basic researcher as well as to physician scientists and clinicians.


2020 ◽  
Author(s):  
Radharani Benvenutti ◽  
Matheus Gallas-Lopes ◽  
Adrieli Sachett ◽  
Matheus Marcon ◽  
Nathan Ryzewski Strogulski ◽  
...  

ABSTRACTBackground and PurposeSchizophrenia pathophysiology has been associated with dopaminergic hyperactivity, loss of parvalbumin-positive GABAergic interneurons, NMDA receptor hypofunction, and redox dysregulation. Most behavioral assays and animal models to study this condition were developed in rodents, leaving room for species-specific biases that could be avoided by cross-species approaches. As MK-801 and amphetamine are largely used in mice and rats to mimic schizophrenia features, this study aimed to investigate the effects of these drugs in zebrafish.Experimental ApproachAdult zebrafish were exposed to MK-801 (1, 5, and 10 μM) or amphetamine (0.625, 2.5, and 10 mg·L-1) and observed in paradigms of locomotor activity and social behavior. Oxidative parameters relevant to schizophrenia were quantified in brain tissue.Key ResultsMK-801 disrupted social interaction, an effect that resembles the negative symptoms of schizophrenia. It also altered locomotion in a context-dependent manner, with hyperactivity when fish were tested in the presence of social cues and hypoactivity when tested alone. On the other hand, exposure to amphetamine was devoid of effects on locomotion and social behavior, while increased lipid peroxidation in the brain.Conclusion and ImplicationsKey outcomes induced by MK-801 in rodents were replicated in zebrafish, which suggests this species is suitable as an alternative model animal to study psychotic disorders. More studies are necessary to further develop preclinical paradigms with this species and ultimately optimize the screening of potential novel treatments.


Author(s):  
Radharani Benvenutti ◽  
Matheus Gallas‐Lopes ◽  
Adrieli Sachett ◽  
Matheus Marcon ◽  
Nathan Ryzewski Strogulski ◽  
...  

2019 ◽  
Vol 42 ◽  
Author(s):  
Nicole M. Baran

AbstractReductionist thinking in neuroscience is manifest in the widespread use of animal models of neuropsychiatric disorders. Broader investigations of diverse behaviors in non-model organisms and longer-term study of the mechanisms of plasticity will yield fundamental insights into the neurobiological, developmental, genetic, and environmental factors contributing to the “massively multifactorial system networks” which go awry in mental disorders.


2003 ◽  
Vol 39 ◽  
pp. 11-24 ◽  
Author(s):  
Justin V McCarthy

Apoptosis is an evolutionarily conserved process used by multicellular organisms to developmentally regulate cell number or to eliminate cells that are potentially detrimental to the organism. The large diversity of regulators of apoptosis in mammalian cells and their numerous interactions complicate the analysis of their individual functions, particularly in development. The remarkable conservation of apoptotic mechanisms across species has allowed the genetic pathways of apoptosis determined in lower species, such as the nematode Caenorhabditis elegans and the fruitfly Drosophila melanogaster, to act as models for understanding the biology of apoptosis in mammalian cells. Though many components of the apoptotic pathway are conserved between species, the use of additional model organisms has revealed several important differences and supports the use of model organisms in deciphering complex biological processes such as apoptosis.


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