Low-rank, Orthogonally Decomposable Tensor Regression with Application to Visual Stimulus Decoding of fMRI Data

Author(s):  
J.C. Poythress ◽  
Jeongyoun Ahn ◽  
Cheolwoo Park
2017 ◽  
Vol 2017 ◽  
pp. 1-11 ◽  
Author(s):  
Xin Wang ◽  
Yanshuang Ren ◽  
Wensheng Zhang

Study of functional brain network (FBN) based on functional magnetic resonance imaging (fMRI) has proved successful in depression disorder classification. One popular approach to construct FBN is Pearson correlation. However, it only captures pairwise relationship between brain regions, while it ignores the influence of other brain regions. Another common issue existing in many depression disorder classification methods is applying only single local feature extracted from constructed FBN. To address these issues, we develop a new method to classify fMRI data of patients with depression and healthy controls. First, we construct the FBN using a sparse low-rank model, which considers the relationship between two brain regions given all the other brain regions. Moreover, it can automatically remove weak relationship and retain the modular structure of FBN. Secondly, FBN are effectively measured by eight graph-based features from different aspects. Tested on fMRI data of 31 patients with depression and 29 healthy controls, our method achieves 95% accuracy, 96.77% sensitivity, and 93.10% specificity, which outperforms the Pearson correlation FBN and sparse FBN. In addition, the combination of graph-based features in our method further improves classification performance. Moreover, we explore the discriminative brain regions that contribute to depression disorder classification, which can help understand the pathogenesis of depression disorder.


Author(s):  
Nastaran Shahparian ◽  
Mehran Yazdi ◽  
Mohammad Reza Khosravi

Purpose: In recent years, resting-state functional magnetic resonance imaging (rs-fMRI) has been increasingly used as a noninvasive and practical method in different areas of neuroscience and psychology for recognizing brain’s mechanism as well as diagnosing neurological diseases. In this work, we use rs-fMRI data for diagnosing Alzheimer disease. Design/methodology/approach: To do that, by using the rs-fMRI of a patient, we computed the time series of some anatomical regions and then applied the Latent Low Rank Representation method to extract suitable features. Next, based on the extracted features we apply a Support Vector Machine (SVM) classifier to determine whether the patient belongs to healthy category, mild stage of the disease or Alzheimer stage. Findings: The obtained classification accuracy for the proposed method is more than 97.5%. Originality/value: We performed different experiments on a database of rs-fMRI data containing the images of 43 healthy subjects, 36 mild cognitive impairment patients and 32 Alzheimer patients and the obtained results demonstrated that the best performance is achieved when the SVM with Gaussian kernel and the features of only 7 regions were used.


2020 ◽  
Vol 2 (4) ◽  
pp. 944-966
Author(s):  
Talal Ahmed ◽  
Haroon Raja ◽  
Waheed U. Bajwa
Keyword(s):  
Low Rank ◽  

2020 ◽  
Vol 2 (2) ◽  
pp. 444-479
Author(s):  
Anru R. Zhang ◽  
Yuetian Luo ◽  
Garvesh Raskutti ◽  
Ming Yuan

Sign in / Sign up

Export Citation Format

Share Document