Specific Detection of Prostate Cancer Cells in Urine by RNA In Situ Hybridization

Author(s):  
Jillian N. Eskra ◽  
Daniel Rabizadeh ◽  
Jiayi Zhang ◽  
William B. Isaacs ◽  
Jun Luo ◽  
...  
Author(s):  
Jillian N. Eskra ◽  
Daniel Rabizadeh ◽  
Leslie Mangold ◽  
Elizabeth Fabian ◽  
W. Nathaniel Brennen ◽  
...  

1991 ◽  
Vol 52 (2) ◽  
pp. 246 ◽  
Author(s):  
Josée J. König ◽  
Sandra de Jong ◽  
Anne Hagemeijer ◽  
Hans Romijn ◽  
Fritz H. Schröder

2016 ◽  
Vol 22 (18) ◽  
pp. 4651-4663 ◽  
Author(s):  
Liana B. Guedes ◽  
Carlos L. Morais ◽  
Fawaz Almutairi ◽  
Michael C. Haffner ◽  
Qizhi Zheng ◽  
...  

2019 ◽  
Vol 10 (1) ◽  
Author(s):  
Suhn Kyong Rhie ◽  
Andrew A. Perez ◽  
Fides D. Lay ◽  
Shannon Schreiner ◽  
Jiani Shi ◽  
...  

Abstract To better understand the impact of chromatin structure on regulation of the prostate cancer transcriptome, we develop high-resolution chromatin interaction maps in normal and prostate cancer cells using in situ Hi-C. By combining the in situ Hi-C data with active and repressive histone marks, CTCF binding sites, nucleosome-depleted regions, and transcriptome profiling, we identify topologically associating domains (TADs) that change in size and epigenetic states between normal and prostate cancer cells. Moreover, we identify normal and prostate cancer-specific enhancer-promoter loops and involved transcription factors. For example, we show that FOXA1 is enriched in prostate cancer-specific enhancer-promoter loop anchors. We also find that the chromatin structure surrounding the androgen receptor (AR) locus is altered in the prostate cancer cells with many cancer-specific enhancer-promoter loops. This creation of 3D epigenomic maps enables a better understanding of prostate cancer biology and mechanisms of gene regulation.


2004 ◽  
Vol 32 (10) ◽  
pp. 1384-1398 ◽  
Author(s):  
Xiaoming He ◽  
Willem F. Wolkers ◽  
John H. Crowe ◽  
David J. Swanlund ◽  
John C. Bischof

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