scholarly journals Evolutionary insights into Mariner-like elements in Apis species

2020 ◽  
Author(s):  
Kakeru Yokoi ◽  
Kiyoshi Kimura ◽  
Hidemasa Bono
Keyword(s):  
Phylogenetic Analysis ◽  
Transposable Element ◽  
Related Species ◽  
Horizontal Transfer ◽  
The Other ◽  
Closely Related Species ◽  
Sequences Analysis ◽  
Almost All

AbstractBackgroundMariner and mariner-like elements (MLEs) are distributed in various species and their sequences are highly diverse. In previous reports, a few transposable element in the genomes of Apis species mainly consist of mariner and MLE. For further insight of Apis MLEs, detailed classifications of Apis MLE and sequences analysis of long MLEs, which may potentially encode the transposase, are needed.ResultsMuch more MLEs were detected in A. mellifera genome compared to other Apis species genomes. They were classified into 31 Drosophila MLE classes. In this classification, almost all of MLEs were classified into the three classes belonging to mellifera subfamilies, suggesting that Apis MLEs which exist thorough Apis species derived from single MLE belonging to mellifera subfamily. Phylogenetic analysis using MLEs in the three classes showed that there two types of clusters, of which one consist of multiple Apis species MLEs, and others of only A. mellifera MLEs. Long MLEs analysis showed that only one long MLE encoding complete transposase was found in all Apis genome except for A. mellifera genome, and the MLE and multiple MLEs similar to it were found in A. mellifera genome. The analysis also showed that other several long MLEs encoding complete transposase were found only in A. mellifera genome.ConclusionsAlmost all of Apis MLEs are mellifera subfamilies. Of these MLEs, one types of them settled in Apis species and burst in A. mellifera genome. The other one of MLEs invaded into A. mellifera genome by horizontal transfer and exploded in A. mellifera genome. This is the first example of the finer aspects of MLE evolution among closely related species.

Pimpinella ibradiensis (Apiaceae), an unusual new species from Turkey

Phytotaxa ◽  
2015 ◽  
Vol 217 (2) ◽  
pp. 164 ◽  
Author(s):  
İlker Çinbilgel ◽  
özkan Eren ◽  
Hayri Duman ◽  
Mustafa Gökceoğlu
Keyword(s):  
New Species ◽  
Geographical Distribution ◽  
Related Species ◽  
Conservation Status ◽  
Identification Key ◽  
The Other ◽  
Site Conditions ◽  
Closely Related Species

Pimpinella ibradiensis, an unusual new species found in the Toka Yayla (İbradı, Antalya) in southern Anatolia, is described and illustrated. Site conditions, synecology and conservation status of P. ibradiensis are considered. In light of the comparison with the other closely related four species, namely P. nephrophylla, P. flabellifolia, P. sintenisii and P. paucidentata, its similarity within the genus are discussed. P. ibradiensis is easly distinguished from its relatives by its white petals, presence of bracts and bracteoles, larger fruits (4–5.5 × 1–2 mm), and having serrulate basal leaves with 60–95 strongly cartilaginous teeth along margins. The geographical distribution of P. ibradiensis and closely related species are mapped and the identification key of those species is updated.

Species delimitation of colour polymorphic Cladophorus (Coleoptera: Lycidae) from New Guinea

Zootaxa ◽  
2017 ◽  
Vol 4320 (3) ◽  
pp. 505 ◽  
Author(s):  
ROMANA KALOUSOVA ◽  
LADISLAV BOCAK
Keyword(s):  
Phylogenetic Analysis ◽  
Mitochondrial Dna ◽  
Related Species ◽  
Species Delimitation ◽  
Morphological Differentiation ◽  
Morphological Characters ◽  
Molecular Data ◽  
Closely Related Species ◽  
Dna Fragment ◽  
Colour Patterns

Cladophorus Guérin-Méneville, 1830 are endemic Papuan net-winged beetles which take part in highly diverse Müllerian mimicry rings. Available specimens were sequenced for cox1–tRNA-Leu–cox2 mitochondrial DNA fragment and the species delimitations were based on the genetic distance, phylogenetic analysis, and morphology. Three earlier described species were identified in the recently collected material and further 10 species are described: C. pallescens sp. nov., C. bicolor sp. nov., C. craterensis sp. nov., C. motykai sp. nov., C. mindikensis sp. nov., C. kailakiensis sp. nov., C. manokwarensis sp. nov., C. haiaensis sp. nov., C. humeralis sp. nov., and C. boceki sp. nov. DNA-based identifications provided some ambiguous results and closely related species could not be robustly delimited using solely molecular data. Additionally, the species limits were based on clearly defined morphological characters and the morphological differentiation was found unlinked from the genetic divergence. Colour patterns cannot be used for identification because all species available in more specimens were polymorphic and followed various local co-mimics. The Papuan fauna of Cladophorus is very diverse and the closely related species regularly occur in limited regions. Differentiation within restricted ranges is therefore considered as the main speciation mode. 

scholarly journals Repeated evolution of asymmetric genitalia and right-sided mating behavior in theDrosophila nannopteraspecies group

2019 ◽  
Author(s):  
Andrea Acurio ◽  
Flor T. Rhebergen ◽  
Sarah Paulus ◽  
Virginie Courtier-Orgogozo ◽  
Michael Lang
Keyword(s):  
Related Species ◽  
Current Data ◽  
The Other ◽  
Genital Morphology ◽  
Closely Related Species ◽  
Outgroup Species ◽  
Repeated Evolution ◽  
Drosophila Pachea ◽  
Species Specific ◽  
Group Species

AbstractBackgroundMale genitals have repeatedly evolved left-right asymmetries, and the causes of such evolution remain unclear. TheDrosophila nannopteragroup contains four species, among which three exhibit left-right asymmetries of distinct genital organs. In the most studied species,Drosophila pachea, males display asymmetric genital lobes and they mate right-sided on top of the female. Copulation position of the other species is unknown.ResultsTo assess whether the evolution of genital asymmetry could be linked to the evolution of one-sided mating, we examined phallus morphology and copulation position inD. pacheaand closely related species. The phallus was found to be symmetric in all investigated species exceptD. pachea, which display an asymmetric phallus with a right-sided gonopore, andD. acanthoptera, which harbor an asymmetrically bent phallus. In all examined species, males were found to position themselves symmetrically on top of the female, except inD. pacheaandD. nannoptera, where males mated right-sided, in distinctive, species-specific positions. In addition, the copulation duration was found to be increased innannopteragroup species compared to closely related outgroup species.ConclusionOur study shows that gains, and possibly losses, of asymmetry in genital morphology and mating position have evolved repeatedly in thenannopteragroup. Current data does not allow us to conclude whether genital asymmetry has evolved in response to changes in mating position, or vice versa.

scholarly journals Transposable Elements and the Evolution of Insects

2021 ◽  
Vol 66 (1) ◽  
pp. 355-372
Author(s):  
Clément Gilbert ◽  
Jean Peccoud ◽  
Richard Cordaux
Keyword(s):  
Transposable Elements ◽  
Related Species ◽  
Horizontal Transfer ◽  
Population Genomics ◽  
Antiviral Immunity ◽  
Closely Related Species ◽  
Phylogenetic Relatedness ◽  
Functional Studies ◽  
Insect Symbionts

Insects are major contributors to our understanding of the interaction between transposable elements (TEs) and their hosts, owing to seminal discoveries, as well as to the growing number of sequenced insect genomes and population genomics and functional studies. Insect TE landscapes are highly variable both within and across insect orders, although phylogenetic relatedness appears to correlate with similarity in insect TE content. This correlation is unlikely to be solely due to inheritance of TEs from shared ancestors and may partly reflect preferential horizontal transfer of TEs between closely related species. The influence of insect traits on TE landscapes, however, remains unclear. Recent findings indicate that, in addition to being involved in insect adaptations and aging, TEs are seemingly at the cornerstone of insect antiviral immunity. Thus, TEs are emerging as essential insect symbionts that may have deleterious or beneficial consequences on their hosts, depending on context.

A giant Permian fusulinid from east-central Alaska with comparisons of all giant fusulinids in western North America

1995 ◽  
Vol 69 (5) ◽  
pp. 805-812 ◽  
Author(s):  
Calvin H. Stevens
Keyword(s):  
North America ◽  
Related Species ◽  
The Other ◽  
Lower Permian ◽  
Early Permian ◽  
Western North America ◽  
Closely Related Species ◽  
East Central ◽  
West Texas ◽  
Species Groups

The discovery of a new locality yielding giant Guadalupian (Lower Permian) fusulinids in east-central Alaska extends the range of these forms much farther north than previously known, and into a tectonostratigraphic terrane from which they previously had not been reported. The number of areas from which giant parafusulinids are known in North America is thus raised to eight. Three of these localities are in rocks that previously had been referred to the allochthonous McCloud belt arc, and one, West Texas, is known to have been part of Paleozoic North America. Comparison of species from all areas suggests that there are two closely related species groups: one represented in Texas and Coahuila, and the other represented in Sonora, northern California, northeastern Washington, southern and northern British Columbia, Alaska, and apparently in Texas. These groups may differ because they are of slightly different ages or because interchange between the faunas of Texas–Coahuila area and the other regions was somewhat inhibited during the Early Permian.

scholarly journals A New Species of Ligyrocoris Stal With a Key to the Northeastern Species (Hemiptera:Lygaeidae)

1963 ◽  
Vol 70 (1) ◽  
pp. 17-21
Author(s):  
Merrill H. Sweet
Keyword(s):  
New Species ◽  
Life Cycle ◽  
New England ◽  
Related Species ◽  
Habitat Preferences ◽  
Life Cycles ◽  
The Other ◽  
Closely Related Species ◽  
Carex Stricta ◽  
A New Species

In the course of current work upon the biology and ecology of the Rhyparochrominae of New England, a new species of Ligyrocoris was discovered. The species runs in Barber's (1921) key to the couplet separating diffusus (Uhler) from sylvestris (L.), but is distinct from either species. While the new species is closely related to these species, it is also quite close to L. depictus which is separated out in a different part of Barber's key.These four closely related species are sympatric in New England, although they are markedly different in their overall distribution. The habitat preferences and life cycles of the species are quite different (Sweet, unpublished). The habitat of the new species described below is most unusual for the genus. The greater part of the type series was collected along the margin of a small pond where sedge clumps were standing in the water among occasional exposed rocks rather than in relatively dry fields or slope habitats where the other species occur. The species feeds upon the seeds of the sedge, Carex stricta Lam, and its life cycle is apparently adapted to that of the sedge, which fruits in late May and June. The insect becomes adult in mid-June and lays eggs until mid-July. The eggs remain in diapause over the summer and winter and hatch in May.

Systematics of the Adiantum philippense complex (Pteridaceae, Polypodiales) in Taiwan

Phytotaxa ◽  
2016 ◽  
Vol 263 (2) ◽  
pp. 113 ◽  
Author(s):  
LI-YAUNG KUO ◽  
TIAN-CHUAN HSU ◽  
YI-HAN CHANG ◽  
YAO-MOAN HUANG ◽  
WEN-LIANG CHIOU
Keyword(s):  
Cryptic Species ◽  
Related Species ◽  
Species Complex ◽  
The Other ◽  
Closely Related Species ◽  
Hybrid Combination ◽  
Reproductive Modes ◽  
Taxonomical Revision

Adiantum philippense s.l. is a member of once-pinnate Adiantum but comprise several cytotaxa with different ploidies and reproductive modes. According to the differences of cytotypes, the up-to-date revision had identified three subspecies under the A. philippense complex. In Taiwan, different ploidies and reproductive modes had also been found in this species complex, and existence of (a) cryptic species among these cytotypes had been suggested. The current study focuses on taxonomical revision of Taiwanese A. philippense complex. We sampled not only different Taiwanese cytotypes/populations but also all subspecies under A. philippense and the closely related species of them. By re-examining their phylogeny, ploidies, and reproductive modes, we confirmed that the sexual diploids in Taiwan belong to Adiantum menglianense, and this species is phylogenetically separated from A. philippense. We further approved that A. menglianense can be morphologically distinguished from A. philippense by their frond features and spore numbers in sporangia. Another taxon of Taiwanese A. philippense complex is A. philippense subsp. philippense, which is an apomictic and triploidy subspecies. Additionally, we assigned lectotypes of A. menglianense, and revised the hybrid combination of A. × meishanianum. We also provided a key in order to identify two taxa under Taiwanese A. philippense complex and the other once-pinnate Adiantum species in Taiwan.

Bryobilimbia, a new generic name for Lecidea hypnorum and closely related species

2014 ◽  
Vol 46 (1) ◽  
pp. 25-37 ◽  
Author(s):  
Alan M. FRYDAY ◽  
Christian PRINTZEN ◽  
Stefan EKMAN
Keyword(s):  
Phylogenetic Analysis ◽  
Related Species ◽  
New Combinations ◽  
Closely Related Species

AbstractThe new generic name Bryobilimbia is proposed for Lecidea hypnorum and the closely related taxa Lecidea ahlesii var. ahlesii, L. ahlesii var. nemoralis, L. diapensiae, L. sanguineoatra and Mycobilimbia australis. A phylogenetic analysis based on five genes shows that Lecidea berengeriana does not belong to this group but is more closely related to Romjularia. Both groups of species have been included in Mycobilimbia by some authors but are instead shown to be most closely related to a group of genera (including Clauzadea, Farnoldia, Lecidoma and Romjularia) that do not belong to Lecideaceae s. str. A neotype is selected for Lichen sanguineoater Wulfen and the new combinations Bryobilimbia ahlesii var. ahlesii, B. ahlesii var. nemoralis, B. australis, B. diapensiae, B. hypnorum and B. sanguineoatra are proposed. A lectotype is also selected for L. templetonii Taylor.

A clarification of Medicago sinskiae

1991 ◽  
Vol 69 (1) ◽  
pp. 100-106 ◽  
Author(s):  
Ernest Small ◽  
Brenda Brookes
Keyword(s):  
Chromosome Number ◽  
Key Words ◽  
Related Species ◽  
The Other ◽  
Species Status ◽  
Closely Related Species

Little information has been available to justify the species status of the rare Turkmenian Medicago sinskiae Uljan. recognized by Uljanova in 1964. The holotype and plants raised from its seeds were examined, the chromosome number was determined, and a numerical taxonomic comparison was made of M. sinskiae and the other 12 species of Medicago section Spirocarpos subsection Pachyspirae. It was found that M. sinskiae is well separated from the most closely related species of Medicago and deserves recognition at the rank of species. Key words: Medicago sinskiae, Leguminoseae, alfalfa, taxonomy.

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