scholarly journals Impact of Model Order Choice on the Results of Parallel Independent Component Analysis

2020 ◽  
Author(s):  
D. M. Jensen ◽  
E. Zendehrouh ◽  
J. Liu ◽  
V. D. Calhoun ◽  
J. A. Turner

AbstractParallel independent component analysis (pICA) is a data-driven method that identifies the maximally independent components of multiple imaging modalities while simultaneously investigating the strength of their correlations. Researchers using pICA are given the option to use the suggested model order calculated by the minimum descriptive length (MDL) algorithm, or they can choose their own model order. To date, there are no suggested guidelines for this choice. To test the sensitivity of pICA to the selection of model order, we applied it to a well-researched brain disorder, schizophrenia, looking at the correlations between patterns of grey matter volume (GM) volume and white matter integrity, measured using fractional anisotropy (FA). We varied model orders from low to high, and tested the sensitivity to disorder effects (cases vs controls), similarity of spatial maps identified across model orders, consolidation or distribution effects related to model order selection, and the performance of the minimum descriptive length (MDL) algorithm. The pICA results (multimodal analysis) were also compared to the ICA (unimodal analysis) for each imaging modality. Across model orders, there was consistent sensitivity to disorder effects, and clustered patterns of spatial maps for both the GM and FA reflecting those differences. The MDL-estimated model order captured the majority, but not all, of the spatial patterns present in the GM and FA. There was not the expected consolidation of spatial maps at lower model orders, nor the distribution of spatial maps at higher model orders. The spatial patterns identified in the ICA closely resemble those found in the pICA, although lacking the benefit of the optimization algorithm, were not as highly correlated. This offers some insight and guidance for researchers interested in using pICA with regard to selecting model order for their particular analysis of multiple imaging modalities.

2020 ◽  
Vol 2020 (14) ◽  
pp. 357-1-357-6
Author(s):  
Luisa F. Polanía ◽  
Raja Bala ◽  
Ankur Purwar ◽  
Paul Matts ◽  
Martin Maltz

Human skin is made up of two primary chromophores: melanin, the pigment in the epidermis giving skin its color; and hemoglobin, the pigment in the red blood cells of the vascular network within the dermis. The relative concentrations of these chromophores provide a vital indicator for skin health and appearance. We present a technique to automatically estimate chromophore maps from RGB images of human faces captured with mobile devices such as smartphones. The ultimate goal is to provide a diagnostic aid for individuals to monitor and improve the quality of their facial skin. A previous method approaches the problem as one of blind source separation, and applies Independent Component Analysis (ICA) in camera RGB space to estimate the chromophores. We extend this technique in two important ways. First we observe that models for light transport in skin call for source separation to be performed in log spectral reflectance coordinates rather than in RGB. Thus we transform camera RGB to a spectral reflectance space prior to applying ICA. This process involves the use of a linear camera model and Principal Component Analysis to represent skin spectral reflectance as a lowdimensional manifold. The camera model requires knowledge of the incident illuminant, which we obtain via a novel technique that uses the human lip as a calibration object. Second, we address an inherent limitation with ICA that the ordering of the separated signals is random and ambiguous. We incorporate a domain-specific prior model for human chromophore spectra as a constraint in solving ICA. Results on a dataset of mobile camera images show high quality and unambiguous recovery of chromophores.


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