scholarly journals Structural and thermodynamic analyses of human TMED1 (p24γ1) Golgi dynamics

2021 ◽  
Author(s):  
Danielly C. A. M. Mota ◽  
Renan M. Mori ◽  
Mariana R. B. Batista ◽  
Luis G. M. Basso ◽  
Iara A. Cardoso ◽  
...  
Keyword(s):  
Secretory Pathway ◽  
Lipid Membrane ◽  
Coiled Coil ◽  
Dependent Manner ◽  
Biophysical Characterization ◽  
Early Secretory Pathway ◽  
Lack Of Information ◽  
Coiled Coil Region ◽  
High Resolution Structure ◽  
Bidirectional Transport

AbstractThe transmembrane emp24 domain-containing proteins (TMED), also called p24 proteins, are members of a family of sorting receptors present in all representatives of the domain Eukarya and abundantly present in all subcompartments of the early secretory pathway, namely the endoplasmic reticulum (ER), the Golgi, and the intermediate compartment. Although essential during the bidirectional transport between the ER and the Golgi, there is still a lack of information regarding the TMEDs structure, oligomerization propensity, and biophysics of their interactions with the transport cargo. Here, we describe the first high-resolution structure of the Golgi dynamics (GOLD) domain of a TMED1 representative and its biophysical characterization in solution. The crystal structure showed a dimer formation that is also present in solution in a salt-dependent manner, suggesting that the GOLD domain can form homodimers even in the absence of the TMED1 coiled-coil region. A molecular dynamics description of the dimer stabilization, with a phylogenetic analysis of the residues important for the oligomerization and a model for the orientation towards the lipid membrane are also presented.

Coupled transport of p24 family members

2000 ◽  
Vol 113 (13) ◽  
pp. 2507-2516 ◽  
Author(s):  
G. Emery ◽  
M. Rojo ◽  
J. Gruenberg
Keyword(s):  
Secretory Pathway ◽  
Coiled Coil ◽  
Coupled Transport ◽  
Early Secretory Pathway ◽  
Coiled Coil Region ◽  
Strict Requirement ◽  
Necessary And Sufficient ◽  
Golgi Network ◽  
Lumenal Domain ◽  
P24 Proteins

Recent studies show that small trans-membrane proteins of approximately 22–24 kDa (the p24 family), which are grouped into 4 sub-families by sequence homology (p23, p24, p25 and p26), are involved in the early secretory pathway. In this study, we have investigated the mutual requirements of ectopically expressed members of the p24 family for targeting to their proper cellular destination. We find that coexpression of p23 and p24 is both necessary and sufficient for each protein to be transported to the cis-Golgi network/Golgi complex. Proteins from other subfamilies did not substitute for either p23 or p24, even after multiple coexpression. However, trafficking of the p23/p24 couple was facilitated by coexpression of proteins from other sub-families. In addition, we find that the sequence resembling an endoplasmic reticulum retrieval signal present in the cytoplasmic domain of p23 (but not p24) is dispensable. In contrast, the conserved coiled-coil region in the lumenal domain is absolutely required in both p23 and p24 for proper targeting of the p23/p24 couple. These data demonstrate that p23 and p24 must interact with each other to reach their destination, but that this strict requirement is combined with a mutual dependence amongst p24 proteins. We speculate that p24 proteins can form different oligomeric complexes, which contribute to confer specialized sorting/trafficking properties to membranes of the early secretory pathway, perhaps serving as membrane organizers.

scholarly journals Membrane-Bound Meet Membraneless in Health and Disease

Cells ◽  
2019 ◽  
Vol 8 (9) ◽  
pp. 1000 ◽  
Author(s):  
Chujun Zhang ◽  
Catherine Rabouille
Keyword(s):  
Phase Separation ◽  
Membrane Trafficking ◽  
Secretory Pathway ◽  
Dependent Manner ◽  
P Bodies ◽  
Early Secretory Pathway ◽  
Cell Organization ◽  
Health And Disease ◽  
Membrane Bound ◽  
And Function

Membraneless organelles (MLOs) are defined as cellular structures that are not sealed by a lipidic membrane and are shown to form by phase separation. They exist in both the nucleus and the cytoplasm that is also heavily populated by numerous membrane-bound organelles. Even though the name membraneless suggests that MLOs are free of membrane, both membrane and factors regulating membrane trafficking steps are emerging as important components of MLO formation and function. As a result, we name them biocondensates. In this review, we examine the relationships between biocondensates and membrane. First, inhibition of membrane trafficking in the early secretory pathway leads to the formation of biocondensates (P-bodies and Sec bodies). In the same vein, stress granules have a complex relationship with the cyto-nuclear transport machinery. Second, membrane contributes to the regulated formation of phase separation in the cells and we will present examples including clustering at the plasma membrane and at the synapse. Finally, the whole cell appears to transit from an interphase phase-separated state to a mitotic diffuse state in a DYRK3 dependent manner. This firmly establishes a crosstalk between the two types of cell organization that will need to be further explored.

scholarly journals ERGIC-53 is a functional mannose-selective and calcium-dependent human homologue of leguminous lectins.

1996 ◽  
Vol 7 (3) ◽  
pp. 483-493 ◽  
Author(s):  
C Itin ◽  
A C Roche ◽  
M Monsigny ◽  
H P Hauri
Keyword(s):  
Secretory Pathway ◽  
Carbohydrate Binding ◽  
Dependent Manner ◽  
Calcium Dependent ◽  
New Class ◽  
Early Secretory Pathway ◽  
Sequence Homologies ◽  
Sorting Receptor ◽  
Lectin Family ◽  
Specificity Domain

Based on sequence homologies with leguminous lectins, the intermediate compartment marker ERGIC-53 was proposed to be a member of a putative new class of animal lectins associated with the secretory pathway. Independent, a promyelocytic protein, MR60, was purified by mannose-column chromatography, and a cDNA was isolated that matched MR60 peptide sequences. This cDNA was identical to that of ERGIC-53 and homologies with the animal lectin family of the galectins were noticed. Not all peptide sequences of MR60, however, were found in ERGIC-53, raising the possibility that another protein associated with ERGIC-53 may possess the lectin activity. Here, we provide the first direct evidence for a lectin function of ERGIC-53. Overexpressed ERGIC-53 binds to a mannose column in a calcium-dependent manner and also co-stains with mannosylated neoglycoprotein in a morphological binding assay. By using a sequential elution protocol we show that ERGIC-53 has selectivity for mannose and low affinity for glucose and GlcNAc, but no affinity for galactose. To experimentally address the putative homology of ERGIC-53 to leguminous lectins, a highly conserved protein family with an invariant asparagine essential for carbohydrate binding, we substituted the corresponding asparagine in ERGIC-53. This mutation, as well as a mutation affecting a second site in the putative carbohydrate recognition domain, abolished mannose-column binding and co-staining with mannosylated neoglycoprotein. These findings establish ERGIC-53 as a lectin and provide functional evidence for its relationship to leguminous lectins. Based on its monosaccharide specificity, domain organization, and recycling properties, we propose ERGIC-53 to function as a sorting receptor for glyco-proteins in the early secretory pathway.

scholarly journals The Erv41–Erv46 complex serves as a retrograde receptor to retrieve escaped ER proteins

2015 ◽  
Vol 208 (2) ◽  
pp. 197-209 ◽  
Author(s):  
Aya Shibuya ◽  
Neil Margulis ◽  
Romain Christiano ◽  
Tobias C. Walther ◽  
Charles Barlowe
Keyword(s):  
Amino Acids ◽  
Endoplasmic Reticulum ◽  
Complex I ◽  
Secretory Pathway ◽  
Isotope Labeling ◽  
Dependent Manner ◽  
Bafilomycin A1 ◽  
Early Secretory Pathway ◽  
Ph Dependent

Signal-dependent sorting of proteins in the early secretory pathway is required for dynamic retention of endoplasmic reticulum (ER) and Golgi components. In this study, we identify the Erv41–Erv46 complex as a new retrograde receptor for retrieval of non–HDEL-bearing ER resident proteins. In cells lacking Erv41–Erv46 function, the ER enzyme glucosidase I (Gls1) was mislocalized and degraded in the vacuole. Biochemical experiments demonstrated that the luminal domain of Gls1 bound to the Erv41–Erv46 complex in a pH-dependent manner. Moreover, in vivo disturbance of the pH gradient across membranes by bafilomycin A1 treatment caused Gls1 mislocalization. Whole cell proteomic analyses of deletion strains using stable isotope labeling by amino acids in culture identified other ER resident proteins that depended on the Erv41–Erv46 complex for efficient localization. Our results support a model in which pH-dependent receptor binding of specific cargo by the Erv41–Erv46 complex in Golgi compartments identifies escaped ER resident proteins for retrieval to the ER in coat protein complex I–formed transport carriers.

scholarly journals Interorganelle communication and membrane shaping in the early secretory pathway

2021 ◽  
Vol 71 ◽  
pp. 95-102
Author(s):  
Pablo Lujan ◽  
Jessica Angulo-Capel ◽  
Morgan Chabanon ◽  
Felix Campelo
Keyword(s):  
Secretory Pathway ◽  
Early Secretory Pathway

Effects of ethanol on gastric epithelial cell phospholipid dynamics and cellular function

1987 ◽  
Vol 252 (2) ◽  
pp. G237-G243
Author(s):  
R. E. Bailey ◽  
R. A. Levine ◽  
J. Nandi ◽  
E. H. Schwartzel ◽  
D. H. Beach ◽  
...  
Keyword(s):  
Membrane Structure ◽  
Lipid Membrane ◽  
Proton Nuclear Magnetic Resonance ◽  
Resonance Spectroscopy ◽  
Dependent Manner ◽  
Chloride Uptake ◽  
Peak Intensity ◽  
Low Concentrations ◽  
Resonance Band ◽  
Dose Dependent

The lipid profile of isolated gastric superficial epithelial cells (SEC) was evaluated by proton nuclear magnetic resonance spectroscopy (1H-NMR). The most conspicuous resonance band in SEC spectra was due to the protons of +N(CH3)3 groups of phosphatidylcholine and, to a lesser degree, other phospholipid derivatives, on the basis of their chemical shift and addition of purified phospholipids. NMR of cell lysates and phospholipid extracts of SEC in deutero-chloroform provided further spectral resolution of these components. Phospholipase or ethanol treatments of SEC produced membrane disorganization reflected as increased peak intensity of the phospholipid signals. In addition, ethanol, in a dose-dependent manner, attenuated paranitrophenyl phosphatase activity, which correlated with inhibition of total and ouabain-sensitive 86Rubidium chloride uptake by SEC. This study suggests that NMR used in conjunction with other biochemical techniques can monitor SEC membrane structure-function relationships. NMR is a potentially powerful noninvasive probe to show changes in lipid membrane organization induced by low concentrations of ethanol (1%) and may indicate an early sign of "cytotoxicity" in intact SEC.

scholarly journals A Coiled-Coil Domain of Melanophilin Is Essential for Myosin Va Recruitment and Melanosome Transport in Melanocytes

2006 ◽  
Vol 17 (11) ◽  
pp. 4720-4735 ◽  
Author(s):  
Alistair N. Hume ◽  
Abul K. Tarafder ◽  
José S. Ramalho ◽  
Elena V. Sviderskaya ◽  
Miguel C. Seabra
Keyword(s):  
Coiled Coil ◽  
Binding Domain ◽  
Actin Binding ◽  
Binding Studies ◽  
Null Cell ◽  
Coiled Coil Region ◽  
Actin Binding Domain ◽  
Transport Assay ◽  
Myosin Va

Melanophilin (Mlph) regulates retention of melanosomes at the peripheral actin cytoskeleton of melanocytes, a process essential for normal mammalian pigmentation. Mlph is proposed to be a modular protein binding the melanosome-associated protein Rab27a, Myosin Va (MyoVa), actin, and microtubule end-binding protein (EB1), via distinct N-terminal Rab27a-binding domain (R27BD), medial MyoVa-binding domain (MBD), and C-terminal actin-binding domain (ABD), respectively. We developed a novel melanosome transport assay using a Mlph-null cell line to study formation of the active Rab27a:Mlph:MyoVa complex. Recruitment of MyoVa to melanosomes correlated with rescue of melanosome transport and required intact R27BD together with MBD exon F–binding region (EFBD) and unexpectedly a potential coiled-coil forming sequence within ABD. In vitro binding studies indicate that the coiled-coil region enhances binding of MyoVa by Mlph MBD. Other regions of Mlph reported to interact with MyoVa globular tail, actin, or EB1 are not essential for melanosome transport rescue. The strict correlation between melanosomal MyoVa recruitment and rescue of melanosome distribution suggests that stable interaction with Mlph and MyoVa activation are nondissociable events. Our results highlight the importance of the coiled-coil region together with R27BD and EFBD regions of Mlph in the formation of the active melanosomal Rab27a-Mlph-MyoVa complex.

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