scholarly journals Volatility in coral cover erodes niche structure, but not diversity, in reef fish assemblages

2021 ◽  
Author(s):  
Cheng-Han Tsai ◽  
Hugh PA Sweatman ◽  
Löic M Thibaut ◽  
Sean R Connolly
Keyword(s):  
Coral Reefs ◽  
Reef Fish ◽  
Fish Assemblages ◽  
Environmental Gradients ◽  
Coral Cover ◽  
Species Abundance ◽  
Alpha Diversity ◽  
Deterministic Processes ◽  
Diversity Systems ◽  
Commonness And Rarity

Environmental fluctuations are becoming increasingly volatile in many ecosystems, highlighting the need to better understand how stochastic and deterministic processes shape patterns of commonness and rarity, particularly in high-diversity systems like coral reefs. Here, we analyse reef fish time-series across the Great Barrier Reef to show that approximately 75% of the variance in relative species abundance is attributable to deterministic, intrinsic species differences. Nevertheless, the relative importance of stochastic factors is markedly higher on reefs that have experienced stronger coral cover volatility. By contrast, alpha diversity and species composition are independent of coral cover volatility but depend on environmental gradients. Our findings imply that increased environmental volatility on coral reefs erodes assemblage's niche structure, an erosion that is not detectable from static measures of biodiversity.

scholarly journals Species diversity and composition drive the aesthetic value of coral reef fish assemblages

2019 ◽  
Vol 15 (11) ◽  
pp. 20190703 ◽  
Author(s):  
Anne-Sophie Tribot ◽  
Julie Deter ◽  
Thomas Claverie ◽  
François Guillhaumon ◽  
Sébastien Villéger ◽  
...  
Keyword(s):  
Coral Reef ◽  
Reef Fish ◽  
Coral Reef Fish ◽  
Emotional Response ◽  
Online Survey ◽  
Fish Assemblages ◽  
Species Abundance ◽  
Aesthetic Value ◽  
Negative Effect ◽  
The Aesthetic

Cultural and recreational values of biodiversity are considered as important dimensions of nature's contribution to people. Among these values, the aesthetics can be of major importance as the appreciation of beauty is one of the simplest forms of human emotional response. Using an online survey, we disentangled the effects of different facets of biodiversity on aesthetic preferences of coral reef fish assemblages that are among the most emblematic assemblages on Earth. While we found a positive saturating effect of species' richness on human preference, we found a net negative effect of species abundance, no effect of species functional diversity and contrasting effects of species composition depending on species' attractiveness. Our results suggest that the biodiversity–human interest relationship is more complex than has been previously stated. By integrating several scales of organization, our study is a step forward in better evaluating the aesthetic value of biodiversity.

Ecological State of Coral Reefs for Conservation and Developmental Planning in Pandan Island, Puerto Princesa City, Philippines

2012 ◽  
Vol 1 (1) ◽  
Author(s):  
Joel G. Becira ◽  
Benjamin J. Gonzales ◽  
Honorio B. Pagliawan
Keyword(s):  
Coral Reefs ◽  
Reef Fish ◽  
Fish Species ◽  
Coral Cover ◽  
Sustainable Use ◽  
Resource Assessment ◽  
Live Coral ◽  
Commercial Fish ◽  
Pinna Nobilis ◽  
Commercially Important

In Palawan, Philippines, Honda Bay is fast becoming a target recreational site for curious domestic and foreign visitors. The general objectives of this resource assessment are to gather information regarding status of the marine resources in Pandan Island, and to provide recommendations for their sustainable use. Assessment was done using line intercept transect (LIT), fish visual census (FVC) and an imaginary transect belt for coral cover, fish, and macro-invertebrates, respectively. Average live coral cover around Pandan Island can be categorized as good (57%), with stations 7 and 1 and 2 categorized as excellent (76-100%) and fair (26-50%) conditions, respectively. Some 178 fish species were recorded in Pandan Island waters of which seven (7) highly target and 29 common commercial fish species were found. The estimated total reef fish biomass around Pandan Island is 588 mt/ km2. A total of eight macro invertebrate (shells, etc.) species belonging to five families was found around Pandan Island. The study concluded that of these eight species, six are commercially important,Tridacnacro cea(taklobo), Tridacnasquamosa (taklobo), Hippopusporcellanus(taklobo), Trochusniloticus(topshell), Pinna nobilis (tarab), and Bohadschiamarmota (sea cucumber). Five of these species the T. crocea, T. squamosa, H. porcellanus, P. nobilis, and T. niloticus are listed as endangered species by International Union for Conservation of Nature.   Keywords - target species, macro-invertebrates, coral cover, coral reefs, reef fish, conservation

scholarly journals Describing macroecological patterns in microbes: Approaches for comparative analyses of operational taxonomic unit read number distribution with a case study of global oceanic bacteria

2019 ◽  
Author(s):  
Ryosuke Nakadai ◽  
Yusuke Okazaki ◽  
Shunsuke Matsuoka
Keyword(s):  
Bacterial Communities ◽  
High Throughput Sequencing ◽  
Environmental Gradients ◽  
Species Abundance ◽  
Operational Taxonomic Unit ◽  
Tree Communities ◽  
Species Abundance Distributions ◽  
Similarities And Differences ◽  
Read Number ◽  
Commonness And Rarity

AbstractDescribing the variation in commonness and rarity in a community is a fundamental method of evaluating biodiversity. Such patterns have been studied in the context of species abundance distributions (SADs) among macroscopic organisms in numerous communities. Recently, models for analyzing variation in local SAD shapes along environmental gradients have been constructed. The recent development of high-throughput sequencing enables evaluation of commonness and rarity in local communities of microbes using operational taxonomic unit (OTU) read number distributions (ORDs), which are conceptually similar to SADs. However, few studies have explored the variation in local microbial ORD shapes along environmental gradients. Therefore, the similarities and differences between SADs and ORDs are unclear, clouding any universal rules of global biodiversity patterns. We investigated the similarities and differences in ORD shapes vs. SADs, and how well environmental variables explain the variation in ORDs along latitudinal and depth gradients. Herein, we integrate ORDS into recent comparative analysis methods for SAD shape using datasets generated on the Tara Oceans expedition. About 56% of the variance in skewness of ORDs among global oceanic bacterial communities was explained with this method. Moreover, we confirmed that the parameter combination constraints of Weibull distributions were shared by ORDs of bacterial communities and SADs of tree communities, suggesting common long-term limitation processes such as adaptation and community persistence acting on current abundance variation. On the other hand, skewness was significantly greater for bacterial communities than tree communities, and many ecological predictions did not apply to bacterial communities, suggesting differences in the community assembly rules for microbes and macroscopic organisms. Approaches based on ORDs provide opportunities to quantify macroecological patterns of microbes under the same framework as macroscopic organisms.

scholarly journals Struktur Komunitas Ikan Karang dan Tutupan Karang pada Terumbu Buatan Artificial Patch Reef (APR)

2020 ◽  
Vol 23 (3) ◽  
pp. 333-340
Author(s):  
Munasik Munasik ◽  
Aldion Adin Nugroho ◽  
Retno Hartati ◽  
Agus Sabdono ◽  
Sugiyanto Sugiyanto ◽  
...  
Keyword(s):  
Community Structure ◽  
Coral Reefs ◽  
Reef Fish ◽  
Coral Cover ◽  
Patch Reef ◽  
Habitat Type ◽  
Artificial Reef ◽  
Reef Fishes ◽  
Live Coral ◽  
Natural Coral

Artificial Patch Reef (APR) have been applied as a new method for Biodiversity Conservation Program at Panjang Island, Jepara since 2015. Previous study suggested that design and location of artificial reefs installation affected to abundance of reef fishes, associated with the artificial reef.  This study aims to investigated community structure of reef fishes associated to artificial patch reef comparing to reef fishes in nearby natural reefs. Assessment of coral reef condition on two habitats were conducted on July 2019, after 4 years deployment.  The results show that artificial patch reefs with a percentage of live coral cover are less than half of natural coral reefs, and have succeeded in increasing the abundance of reef fish with nearly the same density and community structure resembling reef fish in natural coral reefs. The similarity in community structure of the two habitats is probably due to the similarity in habitat type and morphology of the hard corals. The results indicate that Artificial Patch Reef (APR) reefs have increased the coral cover of Acropora branching and resulted in increased reef fish abundance which is compatible with reef fish communities associated with natural coral reefs around it. Aplikasi metode baru terumbu buatan Artificial patch Reef (APR) pada Program Konservasi Bioiversitas Pulau Panjang, Jepara telah dilakukan sejak 2015. Hasil studi menunjukkan bahwa pemilihan desain dan lokasi pemasangan terumbu buatan yang tepat akan meningkatkan kelimpahan ikan karang. Tujuan penelitian ini adalah untuk mengetahui keberhasilan penerapan terumbu buatan APR melalui kelimpahan ikan karang yang berasosiasi pada terumbu buatan dan terumbu karang alami di sekitarnya. Penilaian kondisi terumbu karang tersebut telah dilakukan pada Juli 2019 setelah 4 (empat) tahun pemasangan terumbu buatan. Hasil studi menunjukkan bahwa terumbu buatan dengan persentase tutupan karang hidup lebih kecil, separuhnya dari tutupan pada terumbu karang alami telah berhasil meningkatkan kelimpahan ikan karang dengan densitas hampir sama dan struktur komunitasnya menyerupai ikan karang yang berasosiasi dengan terumbu karang alami. Kesamaan struktur komunitas kedua habitat kemungkinan akibat kesamaan tipe habitat dan morfologi karang keras penyusunya. Hasil ini mengindikasikan bahwa terumbu buatan Artificial patch Reef (APR) telah meningkatkan tutupan karang bercabang Acropora dan berakibat terhadap meningkatnya kelimpahan ikan karang yang sesuai dengan komunitas ikan karang yang berasosiasi dengan terumbu karang alami di sekitarnya.

A comparison of coral reef and coral community fish assemblages in Pacific Panama and environmental factors governing their structure

2008 ◽  
Vol 88 (7) ◽  
pp. 1331-1341 ◽  
Author(s):  
Sarah Benfield ◽  
Laura Baxter ◽  
Hector M. Guzman ◽  
James M. Mair
Keyword(s):  
Coral Reefs ◽  
Reef Fish ◽  
Fish Assemblages ◽  
Size Composition ◽  
Structural Features ◽  
Coral Community ◽  
Percentage Cover ◽  
Dimensional Scaling ◽  
Coral Communities ◽  
Habitat Variables

We compared the reef fish assemblages of two habitats, coral reefs and coral communities (rocky substratum with coral colonies), in the Las Perlas Archipelago in Pacific Panama and attempted to determine associations with habitat variables. We used a modified Atlantic and Gulf Rapid Reef Assessment (AGRRA) survey to record fish species and quadrat transects to determine benthic composition. Multivariate non-parametric multi-dimensional scaling (MDS) ordinations were performed in PRIMER and univariate correlations were used to determine relationships. The reef fish of coral communities were significantly more diverse and species rich than those of coral reefs. The two habitats had significantly different species and size composition, but trophic and family groups overlapped between habitats. Topography, exposure, and the percentage cover of branching and massive corals correlated significantly with differences in fish parameters. The reef fish assemblages of this region appear to be determined more by the larger scale structural features that characterize the two habitats than by features that vary over small scales within the habitats.

Spatial and temporal changes in reef fish assemblages on disturbed coral reefs, north Pacific coast of Costa Rica

2019 ◽  
Vol 40 (1) ◽  
pp. e12532
Author(s):  
Gustavo Arias‐Godínez ◽  
Carlos Jiménez ◽  
Carlos Gamboa ◽  
Jorge Cortés ◽  
Mario Espinoza ◽  
...  
Keyword(s):  
Costa Rica ◽  
Coral Reefs ◽  
Reef Fish ◽  
North Pacific ◽  
Pacific Coast ◽  
Fish Assemblages ◽  
Temporal Changes ◽  
Spatial And Temporal Changes

scholarly journals HUBUNGAN PERSENTASE TUTUPAN KARANG DENGAN KELIMPAHAN IKAN KARANG DI PULAU MENJANGAN KECIL, KEPULAUAN KARIMUNJAWA, KABUPATEN JEPARA,JAWA TENGAH (Relationship of Coral Cover Percentage with Reef Fishes Abundance in Menjangan Kecil Island, Karimunjawa Island, Jepara)

2018 ◽  
Vol 6 (4) ◽  
pp. 333-338
Author(s):  
Fahmi Fahmi ◽  
Supriharyono Supriharyono ◽  
Abdul Ghofar
Keyword(s):  
Coral Reef ◽  
Coral Reefs ◽  
Reef Fish ◽  
Coral Cover ◽  
Reef Fishes ◽  
Line Transect ◽  
Live Coral ◽  
East Side ◽  
Visual Census ◽  
West Side

Ekosistem terumbu karang merupakan kekayaan sumberdaya laut yang memiliki peranan penting dalam mendukung kehidupan berbagai organisme perairan. Salah satu organisme yang memiliki ketergantungan hidup pada terumbu karang adalah ikan karang. Hal ini dikarenakan ikan karang melalui fase hidup sebagian atau seluruhnya di terumbu karang, sehingga terumbu karang menjadi tempat tinggal, tempat mencari makan, tempat berlindung dan tempat berkembang biak.  Penelitian dilaksanakan pada bulan Mei 2017, dengan tujuan untuk mengetahui persentase tutupan karang hidup dan kelimpahan ikan. Serta hubungan persentase tutupan karang dengan kelimpahan ikan karang pada sisi Barat dan Timur Pulau Menjangan Kecil kedalaman 1 dan 3 meter. Metode yang digunakan adalah metode observasi lapangan, dengan metode sampling menggunakan transek garis (line transect) pada data karang dan visual census untuk data ikan sepanjang 25m. Hasil dari penelitian ini menunjukkan bahwa Persentase rata-rata tutupan karang yang diperoleh pada kedalaman 1 meter sisi Barat adalah 73,39%, sedangkan pada kedalaman 3 meter adalah 85,97%. Persentase tutupan karang pada kedalaman 1 meter sisi Timur adalah 63,73%, sedangkan pada kedalaman 3 meter adalah 77,61%. Secara keseluruhan kondisi terumbu karang masih tergolong baik. Kelimpahan rata-rata ikan pada sisi Barat kedalaman 1 meter adalah 70 individu/125 m2, sedangkan pada kedalaman 3 meter adalah 232 individu/125 m2. Kelimpahan ikan sisi Timur kedalaman 1 dan 3 meter masing-masing adalah 49 dan 138 individu/125 m2. Hasil perhitungan indeks korelasi secara keseluruhan menghasilkan nilai 0,8415 dengan koefesien determinasi sebesar 0,7081. Hal ini menunjukkan bahwa pola hubungan persentase tutupan karang dengan kelimpahan ikan karang kuat (signifikan) dan positif (searah). Coral reef ecosystem is a wealth of marine resources that have an important role in supporting the life of various aquatic organisms. One of the organisms that has a living dependence on coral reefs is reef fish. This is because coral fish through a partial or complete life phase on the coral reef, so that coral reefs become a place to live, a place to find food, shelter and breeding ground. The study was conducted in May 2017, with the objective of knowing the percentage of live coral cover and fish abundance. And the correlation of percentage of coral cover with abundance of reef fish on West and East side of Menjangan Kecil Island depth of 1 and 3 meters. The method used is field observation method, with sampling method using line transect on coral data and visual census for fish data along 25m. The results of this study indicate that the average percentage of coral cover obtained at a depth of 1 meter west side is 73.39%, while at a depth of 3 meters is 85.97%. The percentage of coral cover at depth of 1 meter East side is 63,73%, while at depth 3 meter is 77,61%. Overall the condition of coral reefs is still quite good. The average abundance of fish on the west side of 1 meter depth is 70 individuals / 125 m2, while at 3 meters depth is 232 individuals / 125 m2. The abundance of fish on Eastern side, depth of 1 and 3 meters respectively were 49 and 138 individu / 125 m2. Result of calculation of correlation index as a whole yield value 0,8415 with coefficient of determination equal to 0,7081. This shows that the pattern of correlation of percentage of coral cover with abundance of reef fish is strong (significant) and positive (unidirectional).

scholarly journals Benthic structure drives butterflyfish species composition and trophic group abundance

2019 ◽  
Author(s):  
Miguel Barbosa ◽  
Neil Coupland ◽  
Clara Douglas ◽  
Ellen Harrison ◽  
Kelly M James ◽  
...  
Keyword(s):  
Species Richness ◽  
Coral Reef ◽  
Reef Fish ◽  
Coral Reef Fish ◽  
Fish Assemblages ◽  
Coral Cover ◽  
Food Sources ◽  
Fish Diversity ◽  
Live Coral ◽  
Benthic Composition

Corals provide structure and food sources vital for the maintenance of coral reef fish diversity. However, coral reefs are currently under threat from climate change, which has led to the largest recorded loss of live coral. The loss of live coral, and corresponding shift in reef benthic composition, are predicted to impact the abundance and composition of coral reef fish species and communities. In this study, we investigate the effect of changes in reef benthic composition (eg. live coral, dead coral, algae), on the diversity and composition in an assemblage of butterflyfish species, in Faafu Atoll in the Maldives after the 2016 bleaching event. We show that differences in community composition of butterflyfish are associated to benthic structure, reflecting species feeding preferences. Interestingly, however, we also show that lower coral cover is not associated to lower abundance and species richness of butterflyfish. Our results suggest that maintenance of coral reef structure after a disturbance provides key microhabitats to accommodate non-corallivorous butterflyfish, thus maintaining abundance and species richness. Overall our study provides support for regulation of richness and abundance of coral reef fish assemblages to short term changes in coral reef benthic composition after disturbance via turnover in composition.

scholarly journals Coral reef fish assemblages at Clipperton Atoll (Eastern Tropical Pacific) and their relationship with coral cover

2016 ◽  
Vol 80 (4) ◽  
pp. 479 ◽  
Author(s):  
Aurora M. Ricart ◽  
Fabián A. Rodríguez-Zaragoza ◽  
Carlos González-Salas ◽  
Marco Ortiz ◽  
Amílcar L. Cupul-Magaña ◽  
...  
Keyword(s):  
Species Richness ◽  
Coral Reef ◽  
Reef Fish ◽  
Coral Reef Fish ◽  
Fish Assemblage ◽  
Fish Assemblages ◽  
Coral Cover ◽  
Live Coral ◽  
Assemblage Composition ◽  
Live Coral Cover

Clipperton Atoll, one of the most isolated coral reefs worldwide, is of great scientific interest due to its geomorphology and high levels of endemism. This study explored the reef fish assemblage structure of Clipperton Atoll and its relationship with live coral cover. Nine stations were sampled at three sites and three depths (6, 12 and 20 m) around the reef, measuring fish species richness and biomass and hermatypic coral cover (at genus level). We evaluated variation in species richness, biomass and diversity of fish assemblages among sites and depths, as well as the relationship between the entire fish assemblage composition and live coral cover. The results showed that species richness and biomass were similar among sites, but differed across depths, increasing with depth. In contrast, diversity differed among sites but not among depths. Multivariate analyses indicated that fish assemblage composition differed among sites and depths in relation to changes in cover of coral of the genera Pocillopora, Porites, Pavona and Leptoseris, which dominate at different depths. The results showed that fish species richness and diversity were low at Clipperton Atoll and that, in isolated coral reefs with a low habitat heterogeneity and low human disturbance, live coral cover has a significant influence on the spatial variation of the reef fish assemblages. This study highlights the importance of coral habitat structure in shaping coral reef fish assemblages.

scholarly journals Evaluating the efficacy of management zones in the FKNMS: Integrating visual and photogrammetric surveys, and passive acoustics to characterize reef fish assemblages and spawning activity across coral reef management regimes

2018 ◽  
Author(s):  
Kayelyn Simmons ◽  
DelWayne Bohnenstiehl ◽  
David Eggleston
Keyword(s):  
Coral Reefs ◽  
Reef Fish ◽  
Wildlife Conservation ◽  
Fish Assemblages ◽  
Marine Reserve ◽  
Florida Keys ◽  
Marine Ecology ◽  
Reef Management ◽  
Passive Acoustics ◽  
Low Frequencies

New technological approaches in marine ecology, such as (1) passive acoustics to characterize underwater soundscapes, and (2) habitat photogrammetry, which provides high-res, 3D images of habitats, can facilitate efficient and accurate assessments of coral reefs. In collaboration with the Florida Fish & Wildlife Conservation Commission (FWCC) and NOAA’s National Marine Sanctuary Program (NMSP), multidisciplinary, non-invasive research approaches provide transformative ways to characterize reef fish biodiversity as well as the ecological function of essential, hard-bottom habitats. The Florida Keys National Marine Sanctuary (FKNMS) is an ideal study system due to several replicate marine reserve types in addition to existing historical data on reef fish and benthic communities. Underwater soundscape results show significantly different spectral patterns for each site, such that protected sites displayed higher average spectra in low frequencies than fished sites. Additionally, species and family-specific fish chorusing was identified during crepuscular hours at several protected sites. Photogrammetry surveys produced a 3D elevation model used to characterize differences in coral composition contributing to vertical relief. Initial results suggest biodiversity and other ecosystem metrics generally increase with level of protection. These data provide critical baseline evaluations for Post- Hurricane Irma impacts and may assist in monitoring the recovery of coral reefs.

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