Using Gradient as a New Metric for Dynamic Connectivity Estimation from Resting fMRI Data

Author(s):  
Ashkan Faghiri ◽  
Julia M. Stephen ◽  
Yu-Ping Wang ◽  
Tony W. Wilson ◽  
Vince D. Calhoun
2021 ◽  
Vol 11 (13) ◽  
pp. 6216
Author(s):  
Aikaterini S. Karampasi ◽  
Antonis D. Savva ◽  
Vasileios Ch. Korfiatis ◽  
Ioannis Kakkos ◽  
George K. Matsopoulos

Effective detection of autism spectrum disorder (ASD) is a complicated procedure, due to the hundreds of parameters suggested to be implicated in its etiology. As such, machine learning methods have been consistently applied to facilitate diagnosis, although the scarcity of potent autism-related biomarkers is a bottleneck. More importantly, the variability of the imported attributes among different sites (e.g., acquisition parameters) and different individuals (e.g., demographics, movement, etc.) pose additional challenges, eluding adequate generalization and universal modeling. The present study focuses on a data-driven approach for the identification of efficacious biomarkers for the classification between typically developed (TD) and ASD individuals utilizing functional magnetic resonance imaging (fMRI) data on the default mode network (DMN) and non-physiological parameters. From the fMRI data, static and dynamic connectivity were calculated and fed to a feature selection and classification framework along with the demographic, acquisition and motion information to obtain the most prominent features in regard to autism discrimination. The acquired results provided high classification accuracy of 76.63%, while revealing static and dynamic connectivity as the most prominent indicators. Subsequent analysis illustrated the bilateral parahippocampal gyrus, right precuneus, midline frontal, and paracingulate as the most significant brain regions, in addition to an overall connectivity increment.


Author(s):  
Biao Cai ◽  
Julia M. Stephen ◽  
Tony W. Wilson ◽  
Vince D. Calhoun ◽  
Yu-ping Wang

2020 ◽  
Vol 1 (1) ◽  
Author(s):  
M Järvelä ◽  
V Raatikainen ◽  
A Kotila ◽  
J Kananen ◽  
V Korhonen ◽  
...  

Abstract Narcolepsy is a chronic neurological disease characterized by dysfunction of the hypocretin system in brain causing disruption in the wake-promoting system. In addition to sleep attacks and cataplexy, patients with narcolepsy commonly report cognitive symptoms while objective deficits in sustained attention and executive function have been observed. Prior resting-state functional magnetic resonance imaging (fMRI) studies in narcolepsy have reported decreased inter/intranetwork connectivity regarding the default mode network (DMN). Recently developed fast fMRI data acquisition allows more precise detection of brain signal propagation with a novel dynamic lag analysis. In this study, we used fast fMRI data to analyze dynamics of inter resting-state network (RSN) information signaling between narcolepsy type 1 patients (NT1, n = 23) and age- and sex-matched healthy controls (HC, n = 23). We investigated dynamic connectivity properties between positive and negative peaks and, furthermore, their anticorrelative (pos-neg) counterparts. The lag distributions were significantly (P < 0.005, familywise error rate corrected) altered in 24 RSN pairs in NT1. The DMN was involved in 83% of the altered RSN pairs. We conclude that narcolepsy type 1 is characterized with delayed and monotonic inter-RSN information flow especially involving anticorrelations, which are known to be characteristic behavior of the DMN regarding neurocognition.


SLEEP ◽  
2020 ◽  
Vol 43 (Supplement_1) ◽  
pp. A56-A57
Author(s):  
J Teng ◽  
J Ong ◽  
A Patanaik ◽  
J Zhou ◽  
M Chee ◽  
...  

Abstract Introduction Dynamic functional connectivity (DFC) analysis of resting-state fMRI data has been successfully used to track fluctuations in arousal in the human brain. Changes in DFC have also been reported with acute sleep deprivation. Here, we demonstrate that dynamic connectivity states (DCS) previously related to arousal are reproducible, and are associated with individual differences in sustained attention declines after one night of total sleep deprivation. Methods 32 participants underwent two counterbalanced resting-state fMRI scans: during rested wakefulness (RW) and following total sleep deprivation (SD). They also completed the Psychomotor Vigilance Test (PVT), a sustained attention task that is highly sensitive to the effects of sleep loss. SD vulnerability was computed as the decrease in response speed (∆RS) and increase in lapses (∆lapse) in SD compared with RW. Dynamic functional connectivity analysis was conducted on rs-fMRI data. Connectivity matrices were clustered to obtain 5 prototypical DCS. We calculated the proportion of time participants spent in each of these DCS, as well as how often participants transitioned between DCSs. Relationships between SD vulnerability and connectivity metrics were then correlated. Results We recovered two DCS that were highly similar (ρ = .89-.91) to arousal-related DCS observed in previous work (high arousal state (HAS); low arousal state (LAS)). After sleep deprivation, the proportion of time spent in the LAS increased significantly (t29=3.16, p=.0039), while there was no significant change in HAS (t29=-1.43, p=.16). We observed significantly more state transitions in RW compared with SD. Change in LAS and HAS across sleep conditions correlated significantly with SD vulnerability (ΔLASxΔRS: r=-0.64, p<.0001; ΔLASxΔlapse: r=0.43, p=.018; ΔHASxΔRS; r=0.43, p=.019; ΔHASxΔlapse; r=-0.39, p=.033). Finally, Δ%transitions was correlated with ΔRS but not Δlapse. Conclusion This study adds to the evidence that two specific reproducible DCS are robust markers of arousal and attention, and may be useful indicators of SD vulnerability. Support This work was supported by the National Medical Research Council, Singapore (STaR/0015/2013), and the National Research Foundation Science of Learning (NRF2016-SOL002-001).


2016 ◽  
Vol 10 ◽  
Author(s):  
Mustafa S. Cetin ◽  
Jon M. Houck ◽  
Barnaly Rashid ◽  
Oktay Agacoglu ◽  
Julia M. Stephen ◽  
...  

2021 ◽  
pp. 664-673
Author(s):  
Kai Lin ◽  
Biao Jie ◽  
Peng Dong ◽  
Xintao Ding ◽  
Weixin Bian ◽  
...  

2003 ◽  
Vol 14 (3) ◽  
pp. 181-190 ◽  
Author(s):  
Walter Sturm

Abstract: Behavioral and PET/fMRI-data are presented to delineate the functional networks subserving alertness, sustained attention, and vigilance as different aspects of attention intensity. The data suggest that a mostly right-hemisphere frontal, parietal, thalamic, and brainstem network plays an important role in the regulation of attention intensity, irrespective of stimulus modality. Under conditions of phasic alertness there is less right frontal activation reflecting a diminished need for top-down regulation with phasic extrinsic stimulation. Furthermore, a high overlap between the functional networks for alerting and spatial orienting of attention is demonstrated. These findings support the hypothesis of a co-activation of the posterior attention system involved in spatial orienting by the anterior alerting network. Possible implications of these findings for the therapy of neglect are proposed.


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