scholarly journals Domain motions of glucosamine-6P synthase: Comparison of the anisotropic displacements in the crystals and the catalytic hinge-bending rotation

2007 ◽  
Vol 16 (3) ◽  
pp. 485-493 ◽  
Author(s):  
Stéphane Mouilleron ◽  
Béatrice Golinelli-Pimpaneau
Keyword(s):  
2009 ◽  
Vol 96 (12) ◽  
pp. 5003-5012 ◽  
Author(s):  
István Hajdú ◽  
András Szilágyi ◽  
József Kardos ◽  
Péter Závodszky

1982 ◽  
Vol 257 (3) ◽  
pp. 1131-1133 ◽  
Author(s):  
B. Mao ◽  
M.R. Pear ◽  
J.A. McCammon ◽  
F.A. Quiocho

1999 ◽  
Vol 292 (4) ◽  
pp. 945-946
Author(s):  
B. Tiebel ◽  
N. Radzwill ◽  
L.M. Aung-Hilbrich ◽  
V. Helbl ◽  
H.J. Steinhoff ◽  
...  

1983 ◽  
Vol 16 (1) ◽  
pp. 42-46 ◽  
Author(s):  
O. Glatter ◽  
P. Laggner

The possibilities of obtaining structural information from X-ray small-angle scattering experiments with `white' polychromatic synchrotron radiation using line collimation are investigated by numerical simulation. Theoretical scattering curves of geometrical models were smeared with the appropriate wavelength distributions and slit-length functions, afflicted by statistical noise, and then evaluated by identical methods as normally used for experimental data, as described previously [program ITP; Glatter (1977). J. Appl. Cryst. 10, 415–421]. It is shown that even for a wavelength distribution of 50% half width, the information content is not limited to the parameters derived from the central part of the scattering curves, i.e. the radius of gyration and the zero-angle intensity, but also allows qualitative information on particle shape via the distance distribution function p(r). By a `hinge-bending model' consisting of two cylinders linked together at different angles it is demonstrated that changes in the radius of gyration amounting to less than 5% can be detected and quantified, and the qualitative changes in particle shape be reproduced.


2009 ◽  
Vol 284 (15) ◽  
pp. 10088-10099 ◽  
Author(s):  
Kristina Mary Ellen Weimer ◽  
Brianne Leigh Shane ◽  
Michael Brunetto ◽  
Sudeep Bhattacharyya ◽  
Sanchita Hati

Science ◽  
2001 ◽  
Vol 293 (5535) ◽  
pp. 1641-1644 ◽  
Author(s):  
D. E. Benson
Keyword(s):  

Cells ◽  
2022 ◽  
Vol 11 (2) ◽  
pp. 255
Author(s):  
Dániel Szöllősi ◽  
Thomas Stockner

The human serotonin transporter (hSERT) removes the neurotransmitter serotonin from the synaptic cleft by reuptake into the presynaptic nerve terminal. A number of neurologic diseases are associated with dysfunction of the hSERT, and several medications for their treatment are hSERT blockers, including citalopram, fluoxetine, and paroxetine. The substrate transport is energized by the high concentration of external NaCl. We showed through molecular dynamics simulations that the binding of NaCl stabilized the hSERT in the substrate-binding competent conformation, which was characterized by an open access path to the substrate-binding site through the outer vestibule. Importantly, the binding of NaCl reduced the dynamics of the hSERT by decreasing the internal fluctuations of the bundle domain as well as the movement of the bundle domain relative to the scaffold domain. In contrast, the presence of only the bound chloride ion did not reduce the high domain mobility of the apo state.


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