scholarly journals Comparative proteome analysis of propionate degradation bySyntrophobacter fumaroxidansin pure culture and in coculture with methanogens

2018 ◽  
Vol 20 (5) ◽  
pp. 1842-1856 ◽  
Author(s):  
Vicente T. Sedano-Núñez ◽  
Sjef Boeren ◽  
Alfons J. M. Stams ◽  
Caroline M. Plugge
Keyword(s):  
Pure Culture ◽  
Proteome Analysis ◽  
Propionate Degradation

scholarly journals Proteomic Analysis of a Syntrophic Coculture of Syntrophobacter fumaroxidans MPOBT and Geobacter sulfurreducens PCAT

2021 ◽  
Vol 12 ◽  
Author(s):  
Monir Mollaei ◽  
Maria Suarez-Diez ◽  
Vicente T. Sedano-Nunez ◽  
Sjef Boeren ◽  
Alfons J. M. Stams ◽  
...  
Keyword(s):  
Pure Culture ◽  
Formate Dehydrogenase ◽  
Geobacter Sulfurreducens ◽  
Acetate Metabolism ◽  
Differential Abundance ◽  
Methanospirillum Hungatei ◽  
Interspecies Electron Transfer ◽  
Lower Abundance ◽  
Associated Proteins ◽  
Propionate Degradation

We established a syntrophic coculture of Syntrophobacter fumaroxidans MPOBT (SF) and Geobacter sulfurreducens PCAT (GS) growing on propionate and Fe(III). Neither of the bacteria was capable of growth on propionate and Fe(III) in pure culture. Propionate degradation by SF provides acetate, hydrogen, and/or formate that can be used as electron donors by GS with Fe(III) citrate as electron acceptor. Proteomic analyses of the SF-GS coculture revealed propionate conversion via the methylmalonyl-CoA (MMC) pathway by SF. The possibility of interspecies electron transfer (IET) via direct (DIET) and/or hydrogen/formate transfer (HFIT) was investigated by comparing the differential abundance of associated proteins in SF-GS coculture against (i) SF coculture with Methanospirillum hungatei (SF-MH), which relies on HFIT, (ii) GS pure culture growing on acetate, formate, hydrogen as propionate products, and Fe(III). We noted some evidence for DIET in the SF-GS coculture, i.e., GS in the coculture showed significantly lower abundance of uptake hydrogenase (43-fold) and formate dehydrogenase (45-fold) and significantly higher abundance of proteins related to acetate metabolism (i.e., GltA; 62-fold) compared to GS pure culture. Moreover, SF in the SF-GS coculture showed significantly lower abundance of IET-related formate dehydrogenases, Fdh3 (51-fold) and Fdh5 (29-fold), and the rate of propionate conversion in SF-GS was 8-fold lower than in the SF-MH coculture. In contrast, compared to GS pure culture, we found lower abundance of pilus-associated cytochrome OmcS (2-fold) and piliA (5-fold) in the SF-GS coculture that is suggested to be necessary for DIET. Furthermore, neither visible aggregates formed in the SF-GS coculture, nor the pili-E of SF (suggested as e-pili) were detected. These findings suggest that the IET mechanism is complex in the SF-GS coculture and can be mediated by several mechanisms rather than one discrete pathway. Our study can be further useful in understanding syntrophic propionate degradation in bioelectrochemical and anaerobic digestion systems.

Proteome analysis of cerebrospinal fluid in patients with Multiple System Atrophy (MSA)

2008 ◽  
Vol 35 (S 01) ◽  
Author(s):  
S Werz ◽  
V Lehmensiek ◽  
S Süssmuth ◽  
H Mogel ◽  
J Brettschneider ◽  
...  
Keyword(s):  
Cerebrospinal Fluid ◽  
Multiple System Atrophy ◽  
Proteome Analysis

Protective effects of soy-isoflavones in cardiovascular disease

2008 ◽  
Vol 28 (01/02) ◽  
pp. 85-88 ◽  
Author(s):  
D. Fuchs ◽  
H. Daniel ◽  
U. Wenzel
Keyword(s):  
Cardiovascular Disease ◽  
Endothelial Cells ◽  
Molecular Mechanisms ◽  
Dietary Intervention ◽  
Mononuclear Cells ◽  
Oxidized Ldl ◽  
Proteome Analysis ◽  
Soy Isoflavones ◽  
Protective Effects ◽  
Estrogen Production

SummaryEpidemiological studies indicate that the consumption of soy-containing food may prevent or slow-down the development of cardiovascular disease. In endothelial cells application of a soy extract or a combination of the most abundant soy isoflavones genistein and daidzein both inhibited apoptosis, a driving force in atherosclerosis development, when applied in combination with oxidized LDL or homocysteine. Proteome analysis revealed that the stressorinduced alteration of protein expression profile was reversed by the soy extract or the genistein/daidzein mixture. Only few protein entities that could be functionally linked to mitochondrial dysfunction were regulated in common by both application forms of isoflavones. A dietary intervention with isoflavone-enriched soy extract in postmenopausal women, who generally show strongly increased cardiovascular risk due to diminished estrogen production, led to significant alterations in the steady state levels of proteins from mononuclear blood cells. The proteins identified by proteome analysis revealed that soy isoflavones may increase the anti-inflammatory response in blood mononuclear cells thereby contributing to the atherosclerosispreventive activities of a soy-rich diet. Conclusion: By proteome analysis protein targets were identified in vitro in endothelial cells that respond to soy isoflavones and that may decipher molecular mechanisms through which soy products exert their protective effects in the vasculature.

Proteome analysis of 3,5-T2-treated primary mouse hepatocytes

2018 ◽  
Author(s):  
Janine Golchert ◽  
Julika Lietzow ◽  
Uwe Volker ◽  
Georg Homuth ◽  
Josef Kohrle
Keyword(s):  
Proteome Analysis ◽  
Primary Mouse Hepatocytes ◽  
Primary Mouse ◽  
Mouse Hepatocytes

Proteome Analysis of UV-B–Induced Anti-apoptotic Regulatory Factors¶

2005 ◽  
Vol 81 (4) ◽  
pp. 823 ◽  
Author(s):  
Yuko Ibuki ◽  
Hirotaka Naitou ◽  
Norio Ohashi ◽  
Rensuke Goto
Keyword(s):  
Proteome Analysis ◽  
Regulatory Factors

Proteome Analysis of UVB-Induced Anti-Apoptotic Regulatory Factors

2005 ◽  
Author(s):  
Yuko Ibuki ◽  
Hirotaka Naitou ◽  
Norio Ohashi ◽  
Rensuke Goto
Keyword(s):  
Proteome Analysis ◽  
Regulatory Factors
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