scholarly journals Species distribution models as a tool to estimate reproductive parameters: a case study with a passerine bird species

2012 ◽  
Vol 81 (4) ◽  
pp. 781-787 ◽  
Author(s):  
Mattia Brambilla ◽  
Gentile F. Ficetola
Forests ◽  
2020 ◽  
Vol 11 (11) ◽  
pp. 1195
Author(s):  
Rebecca Dickson ◽  
Marc Baker ◽  
Noémie Bonnin ◽  
David Shoch ◽  
Benjamin Rifkin ◽  
...  

Projects to reduce emissions from deforestation and degradation (REDD) are designed to reduce carbon emissions through avoided deforestation and degradation, and in many cases, to produce additional community and biodiversity conservation co-benefits. While these co-benefits can be significant, quantifying conservation impacts has been challenging, and most projects use simple species presence to demonstrate positive biodiversity impact. Some of the same tools applied in the quantification of climate mitigation benefits have relevance and potential application to estimating co-benefits for biodiversity conservation. In western Tanzania, most chimpanzees live outside of national park boundaries, and thus face threats from human activity, including competition for suitable habitat. Through a case study of the Ntakata Mountains REDD project in western Tanzania, we demonstrate a combined application of deforestation modelling with species distribution models to assess forest conservation benefits in terms of avoided carbon emissions and improved chimpanzee habitat. The application of such tools is a novel approach that we argue permits the better design of future REDD projects for biodiversity co-benefits. This approach also enables project developers to produce the more manageable, accurate and cost-effective monitoring, reporting and verification of project impacts that are critical to verification under carbon standards.


Ecography ◽  
2012 ◽  
Vol 36 (6) ◽  
pp. 649-656 ◽  
Author(s):  
Tereza Cristina Giannini ◽  
Daniel S. Chapman ◽  
Antonio Mauro Saraiva ◽  
Isabel Alves-dos-Santos ◽  
Jacobus C. Biesmeijer

Author(s):  
Di Chen ◽  
Yexiang Xue ◽  
Daniel Fink ◽  
Shuo Chen ◽  
Carla P. Gomes

Understanding how species are distributed across landscapes over time is a fundamental question in biodiversity research. Unfortunately, most species distribution models only target a single species at a time, despite strong ecological evidence that species are not independently distributed. We propose Deep Multi-Species Embedding (DMSE), which jointly embeds vectors corresponding to multiple species as well as vectors representing environmental covariates into a common high-dimensional feature space via a deep neural network. Applied to bird observational data from the citizen science project eBird, we demonstrate how the DMSE model discovers inter-species relationships to outperform single-species distribution models (random forests and SVMs) as well as competing multi-label models. Additionally, we demonstrate the benefit of using a deep neural network to extract features within the embedding and show how they improve the predictive performance of species distribution modelling. An important domain contribution of the DMSE model is the ability to discover and describe species interactions while simultaneously learning the shared habitat preferences among species. As an additional contribution, we provide a graphical embedding of hundreds of bird species in the Northeast US.


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