Approximating prediction error covariances among additive genetic effects within animals in multiple-trait and random regression models

2004 ◽  
Vol 121 (2) ◽  
pp. 77-89 ◽  
Author(s):  
B. Tier ◽  
K. Meyer
2018 ◽  
Vol 96 (suppl_3) ◽  
pp. 60-61
Author(s):  
R Khorshidi ◽  
M MacNeil ◽  
D Hays ◽  
M Abo-Ismail ◽  
J Crowley ◽  
...  

2008 ◽  
Vol 51 (3) ◽  
pp. 235-246
Author(s):  
F. G. Kesbi ◽  
M. Eskandarinasab ◽  
M. H. Shahir

Abstract. In the present study the growth data of Mehraban sheep were used to estimate direct and maternal additive genetic effects together with direct and maternal permanent environmental effects on body weight from birth to 270 days of age using random regression models. The fixed effects of the model were age of dam, type of birth and contemporary groups. Animal, dam, animal and maternal permanent environmental effects were considered as random effects. The models were fitted to the data using Legendre polynomials for age of lambs. Changes in residual (measurement error) variance with age were modeled by a variance function. Direct heritability estimates for the later ages with the least records tended to be overestimated, particularly heritability beyond 180 days. Maternal heritability estimates increased after birth to a maximum around 120 days of age and decreased thereafter. The results showed that covariance between weights of lambs for a considerable range of ages can be modelled properly using random regression.


2013 ◽  
Vol 96 (9) ◽  
pp. 5923-5932 ◽  
Author(s):  
Rusbel Raul Aspilcueta Borquis ◽  
Francisco Ribeiro de Araujo Neto ◽  
Fernando Baldi ◽  
Naudin Hurtado-Lugo ◽  
Gregório M.F. de Camargo ◽  
...  

2003 ◽  
Vol 81 (4) ◽  
pp. 927-932 ◽  
Author(s):  
P. R. C. Nobre ◽  
I. Misztal ◽  
S. Tsuruta ◽  
J. K. Bertrand ◽  
L. O. C. Silva ◽  
...  

Animals ◽  
2020 ◽  
Vol 10 (12) ◽  
pp. 2410
Author(s):  
Hinayah R. Oliveira ◽  
Luiz F. Brito ◽  
Stephen P. Miller ◽  
Flavio S. Schenkel

This study aimed to propose novel longevity indicators by comparing genetic parameters for traditional (TL; i.e., the cow’s lifespan after the first calving) and functional (FL; i.e., how long the cow stayed in the herd while also calving; assuming no missing (FLa) or missing (FLb) records for unknown calving) longevity, considering different culling reasons (natural death, structural problems, disease, fertility, performance, and miscellaneous). Longevity definitions were evaluated from 2 to 15 years of age, using single- and multiple-trait Bayesian random regression models (RRM). The RRM fitting heterogenous residual variance and fourth order Legendre polynomials were considered as the optimal models for the majority of longevity indicators. The average heritability estimates over ages for FLb (from 0.08 to 0.25) were always higher than those for FLa (from 0.07 to 0.19), and higher or equal to the ones estimated for TL (from 0.07 to 0.23), considering the different culling reasons. The average genetic correlations estimated between ages were low to moderate (~0.40), for all longevity definitions and culling reasons. However, removing the extreme ages (i.e., 2 and >12 years) increased the average correlation between ages (from ~0.40 to >0.70). The genetic correlations estimated between culling reasons were low (0.12 and 0.20 on average, considering all ages and ages between 3 and 12 years old, respectively), indicating that longevity based on different culling reasons should be considered as different traits in the genetic evaluations. Higher average genetic correlations (estimated from 3 to 12 years old) were observed between TL and FLb (0.73) in comparison to TL and FLa (0.64), or FLa and FLb (0.65). Consequently, a higher average proportion of commonly-selected sires, for the top 1% sires, was also observed between TL and FLb (91.74%), compared to TL and FLa (59.68%), or FLa and FLb (61.01%). Higher prediction accuracies for the expected daughter performances (calculated based on the pedigree information) were obtained for FLb in comparison to TL and FLa. Our findings indicate that FLb is preferred for the genetic evaluation of longevity. In addition, it is recommended including multiple longevity traits based on different groups of culling reasons in a selection sub-index, as they are genetically-different traits. Genetic selection based on breeding values at the age of four years is expected to result in greater selection responses for increased longevity in North American Angus cattle.


2003 ◽  
Vol 81 (4) ◽  
pp. 918-926 ◽  
Author(s):  
P. R. C. Nobre ◽  
I. Misztal ◽  
S. Tsuruta ◽  
J. K. Bertrand ◽  
L. O. C. Silva ◽  
...  

2010 ◽  
Vol 39 (12) ◽  
pp. 2617-2624 ◽  
Author(s):  
Igor de Oliveira Biassus ◽  
Jaime Araújo Cobuci ◽  
Claudio Napolis Costa ◽  
Paulo Roberto Nogara Rorato ◽  
José Braccini Neto ◽  
...  

Total numbers of 56,508, 35,091 and 8,326 records of milk, fat, and protein test-day yields, respectively, were used to estimate genetic parameters for six persistency measures on milk, fat and protein productions of Holstein cows reared in Minas Gerais state. Covariance components for additive genetic effects and permanent environmental effects were estimated by REML in random regression models using Legendre polynomials from the third to the sixth order. Overall, models with the highest orders of Legendre polynomials showed the best quality of adjustments of these productive records. Heritability estimates obtained by the models for persistence in milk, fat, and protein yields ranged from 0.04 to 0.32, from 0.00 to 0.23, and from 0.00 to 0.27, respectively. Values of genetic correlation estimates between persistence and total 305-day milk, fat, and protein yields ranged from -0.38 to 0.54, from -0.39 to 0.97, and from -0.78 to 0.67, respectively. Persistence measurement proposed by Jakobsen (PS2) is preferential for using in further genetic evaluations for persistence in milk, fat and protein yields of Holstein cows in Minas Gerais state.


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