scholarly journals Correlative Light and Volume Electron Microscopy (vCLEM): How Community Participation Can Advance Developing Technologies

2021 ◽  
Author(s):  
Christopher J. Guerin ◽  
Saskia Lippens
Nature ◽  
2021 ◽  
Author(s):  
C. Shan Xu ◽  
Song Pang ◽  
Gleb Shtengel ◽  
Andreas Müller ◽  
Alex T. Ritter ◽  
...  

2020 ◽  
Vol 30 (5) ◽  
pp. 3427-3428
Author(s):  
Toko Kikuchi ◽  
Juncal Gonzalez-Soriano ◽  
Asta Kastanauskaite ◽  
Ruth Benavides-Piccione ◽  
Angel Merchan-Perez ◽  
...  

Microscopy ◽  
2019 ◽  
Vol 68 (4) ◽  
pp. 316-329
Author(s):  
Eiji Notsu ◽  
Kazunori Toida

Abstract The olfactory bulb (OB) contains various interneuron types that play key roles in processing olfactory information via synaptic contacts. Many previous studies have reported synaptic connections of heterogeneous interneurons in superficial OB layers. In contrast, few studies have examined synaptic connections in deep layers because of the lack of a selective marker for intrinsic neurons located in the deeper layers, including the mitral cell layer, internal plexiform layer (IPL) and granule cell layer. However, neural circuits in the deep layers are likely to have a strong effect on the output of the OB because of the cellular composition of these regions. Here, we analyzed the calbindin-immunoreactive neurons in the IPL, one of the clearly neurochemically defined interneuron types in the deep layers, using multiple immunolabeling and confocal laser scanning microscopy combined with electron microscopic three-dimensional serial-section reconstruction, enabling correlated laser and volume electron microscopy (EM). Despite a resemblance to the morphological features of deep short axon cells, IPL calbindin-immunoreactive (IPL-CB-ir) neurons lacked axons. Furthermore, multiple immunolabeling for plural neurochemicals indicated that IPL-CB-ir neurons differed from any interneuron types reported previously. We identified symmetrical synapses formed by IPL-CB-ir neurons on granule cells (GCs) using correlated laser and volume EM. These synapses might inhibit GCs and thus disinhibit mitral and tufted cells. Our present findings indicate, for the first time, that IPL-CB-ir neurons are involved in regulating the activities of projection neurons, further suggesting their involvement in synaptic circuitry for output from the deeper layers of the OB, which has not previously been clarified.


2018 ◽  
Vol 12 ◽  
Author(s):  
Ben Mulcahy ◽  
Daniel Witvliet ◽  
Douglas Holmyard ◽  
James Mitchell ◽  
Andrew D. Chisholm ◽  
...  

Micron ◽  
2014 ◽  
Vol 61 ◽  
pp. 9-19 ◽  
Author(s):  
Christopher J. Peddie ◽  
Lucy M. Collinson

Nature ◽  
2021 ◽  
Author(s):  
C. Shan Xu ◽  
Song Pang ◽  
Gleb Shtengel ◽  
Andreas Müller ◽  
Alex T. Ritter ◽  
...  

2017 ◽  
Author(s):  
Michał Januszewski ◽  
Jörgen Kornfeld ◽  
Peter H. Li ◽  
Art Pope ◽  
Tim Blakely ◽  
...  

AbstractReconstruction of neural circuits from volume electron microscopy data requires the tracing of complete cells including all their neurites. Automated approaches have been developed to perform the tracing, but without costly human proofreading their error rates are too high to obtain reliable circuit diagrams. We present a method for automated segmentation that, like the majority of previous efforts, employs convolutional neural networks, but contains in addition a recurrent pathway that allows the iterative optimization and extension of the reconstructed shape of individual neural processes. We used this technique, which we call flood-filling networks, to trace neurons in a data set obtained by serial block-face electron microscopy from a male zebra finch brain. Our method achieved a mean error-free neurite path length of 1.1 mm, an order of magnitude better than previously published approaches applied to the same dataset. Only 4 mergers were observed in a neurite test set of 97 mm path length.


2019 ◽  
Vol 13 ◽  
Author(s):  
Ben Mulcahy ◽  
Daniel Witvliet ◽  
Douglas Holmyard ◽  
James Mitchell ◽  
Andrew D. Chisholm ◽  
...  

Sign in / Sign up

Export Citation Format

Share Document