scholarly journals Adaptive and maladaptive genetic diversity in small populations: Insights from the Brook Charr ( Salvelinus fontinalis ) case study

2020 ◽  
Vol 29 (18) ◽  
pp. 3429-3445
Author(s):  
Anne‐Laure Ferchaud ◽  
Maeva Leitwein ◽  
Martin Laporte ◽  
Damien Boivin‐Delisle ◽  
Bérénice Bougas ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Salvelinus Fontinalis ◽  
Small Populations ◽  
Brook Charr

scholarly journals LANDSCAPE STRUCTURE AND HIERARCHICAL GENETIC DIVERSITY IN THE BROOK CHARR, SALVELINUS FONTINALIS

Evolution ◽  
2007 ◽  
Vol 55 (5) ◽  
pp. 1016-1028 ◽  
Author(s):  
Vincent Castric ◽  
Forrest Bonney ◽  
Louis Bernatchez
Keyword(s):  
Genetic Diversity ◽  
Landscape Structure ◽  
Salvelinus Fontinalis ◽  
Brook Charr

scholarly journals The Rise and Fall of Isolation by Distance in the Anadromous Brook Charr (Salvelinus fontinalis Mitchill)

Genetics ◽  
2003 ◽  
Vol 163 (3) ◽  
pp. 983-996 ◽  
Author(s):  
Vincent Castric ◽  
Louis Bernatchez
Keyword(s):  
Genetic Diversity ◽  
Allelic Richness ◽  
Salvelinus Fontinalis ◽  
Isolation By Distance ◽  
Geographic Range ◽  
Brook Charr ◽  
Coastal Fish ◽  
One Dimensional ◽  
Postglacial Colonization ◽  
Geographic Patterns

Abstract Geographic patterns of genetic diversity depend on a species’ demographic properties in a given habitat, which may change over time. The rates at which patterns of diversity respond to changes in demographic properties and approach equilibrium are therefore pivotal in our understanding of spatial patterns of diversity. The brook charr Salvelinus fontinalis is a coastal fish exhibiting limited marine movements, such that a stable one-dimensional isolation-by-distance (IBD) pattern should be observed over the whole range. Its range, however, recently shifted northward such that northern populations may still be in the process of reaching equilibrium. We investigated variation in IBD patterns, genetic divergence, and allelic richness at six microsatellite markers in 2087 anadromous brook charr from 59 rivers along the most likely postglacial colonization route. We observed a decrease in allelic richness, together with an increase in differentiation and a decrease in IBD in the most recently colonized northern populations, as expected following recent colonization. Contrary to expectation, however, similar patterns were also observed at the southernmost part of the range, despite the fact that these populations are not considered to be newly colonized. We propose that the loss of dispersal capabilities associated with anadromy may have caused the southernmost populations to evolve relatively independently of one another. This study thus demonstrated that changes in a species’ geographic range and dispersal capabilities may contribute to shaping geographic patterns of genetic diversity.

scholarly journals Adaptive and maladaptive genetic diversity in small populations; insights from the Brook Charr (Salvelinus fontinalis) case study

2019 ◽  
Author(s):  
Anne-Laure Ferchaud ◽  
Maeva Leitwein ◽  
Martin Laporte ◽  
Damien Boivin-Delisle ◽  
Bérénice Bougas ◽  
...  
Keyword(s):  
Transposable Elements ◽  
Genetic Drift ◽  
Environmental Variables ◽  
Evolutionary Biology ◽  
Salvelinus Fontinalis ◽  
Small Populations ◽  
Deleterious Mutations ◽  
Brook Charr ◽  
Main Driver ◽  
Genomic Regions

AbstractInvestigating the relative importance of neutral versus selective processes governing the accumulation of genetic variants is a key goal in evolutionary biology. This is particularly true in the context of small populations, where genetic drift can counteract the effect of selection. In this study, we investigated the accumulation of putatively beneficial and harmful variations using 7,950 high-quality filtered SNPs among 36 lacustrine, seven riverine and seven anadromous Brook Charr (Salvelinus fontinalis) populations (n = 1,193) from Québec, Canada. Using the Provean algorithm, we observed an accumulation of deleterious mutations that tend to be more prevalent in isolated lacustrine and riverine populations than the more connected anadromous populations. In addition, the absence of correlation between the occurrence of putative beneficial nor deleterious mutations and local recombination rate supports the hypothesis that genetic drift might be the main driver of the accumulation of such variants. Despite the effect of pronounced genetic drift and limited gene flow in non-anadromous populations, several loci representing biological functions of potential adaptive significance were associated with environmental variables, and particularly with temperature. We also identified genomic regions associated with anadromy. We also observed an overrepresentation of transposable elements associated with variation in environmental variables, thus supporting the importance of transposable elements in adaptation.

Evolutionary genetics of small populations

2017 ◽  
Author(s):  
Richard Frankham ◽  
Jonathan D. Ballou ◽  
Katherine Ralls ◽  
Mark D. B. Eldridge ◽  
Michele R. Dudash ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Population Size ◽  
Evolutionary Genetics ◽  
Small Population ◽  
Small Populations ◽  
Effective Population ◽  
Genetic Management ◽  
Evolutionary Genetic ◽  
Loss Of Genetic Diversity ◽  
Number Of Individuals

Genetic management of fragmented populations involves the application of evolutionary genetic theory and knowledge to alleviate problems due to inbreeding and loss of genetic diversity in small population fragments. Populations evolve through the effects of mutation, natural selection, chance (genetic drift) and gene flow (migration). Large outbreeding, sexually reproducing populations typically contain substantial genetic diversity, while small populations typically contain reduced levels. Genetic impacts of small population size on inbreeding, loss of genetic diversity and population differentiation are determined by the genetically effective population size, which is usually much smaller than the number of individuals.

Thinning in mature eastern white pine: 43-year case study

2002 ◽  
Vol 78 (4) ◽  
pp. 539-549 ◽  
Author(s):  
Paul D Anderson ◽  
John C Zasada ◽  
Glen W Erickson ◽  
Zigmond A Zasada
Keyword(s):  
Genetic Diversity ◽  
Dna Analysis ◽  
Large Diameter ◽  
White Pine ◽  
Thinning Intensity ◽  
Pine Regeneration ◽  
Volume Production ◽  
Pine Stands ◽  
Over Time

A white pine (Pinus strobus L.) stand at the western margin of the species range, approximately 125 years of age at present, was thinned in 1953 from 33.5 m2 ha-1 to target residual basal areas of 18.4, 23.0, 27.5, and 32.1 m2 ha-1 . Repeated measurement over the following 43-years indicated that the greatest total volume production and the greatest number of large diameter trees occurred in the unit of highest residual density. Over time, the distribution of stems was predominantly random although mortality between 1979 and 1996 resulted in a tendency for clumping in the 23.0 and 27.5 m2 ha-1 treatments. DNA analysis indicated that thinning intensity had little effect on the genetic diversity of residual white pine. This study suggests that mature white pine stands in northern Minnesota may be managed at relatively high densities without loss of productivity. However, regardless of overstory density, there was little or no white pine regeneration occurring in this stand. Key words: thinning, growth, genetic diversity, molecular markers, spatial pattern, regeneration

Bénéfices à court terme des mouvements anadromes saisonniers pour une population d'omble de fontaine (Salvelinus fontinalis) du Nouveau Québec

1991 ◽  
Vol 48 (11) ◽  
pp. 2212-2222 ◽  
Author(s):  
Jean-François Doyon ◽  
Christiane Hudon ◽  
Roderick Morin ◽  
F. G. Whoriskey Jr.
Keyword(s):  
Water Level ◽  
Egg Size ◽  
Salvelinus Fontinalis ◽  
Condition Factor ◽  
Size At Maturity ◽  
Brook Charr ◽  
Tissue Water Content ◽  
Tissue Water ◽  
Single Population ◽  
Energetic Reserves

This study characterizes the seasonal anadromous movements of a brook charr population and compares its biological and energetic characteristics with charr spending summer in freshwaters. Downstream movements monitored at a counting fence over 3 yr were most intense in spring but occurred until fall and were positively correlated with rapid increases of water level. The timing of movements varied from year to year. Smaller charr were most subject to being swept downstream compared with freshwater residents, and most trout were concentrated near the mouth of the river. These patterns suggest that the downstream movements of charr in this system are passive. Upstream migrants had a higher condition factor and a lower tissue water content than freshwater residents, indicating that downstream movements result in a faster accumulation of energetic reserves during summer. However, the fortuitous character of anadromous migrations as well as the absence of differences in the biological characteristics (growth, size at maturity, fecundity, egg size) suggests that anadromous and resident fish belong to a single population whose yearly migrant component could be randomly determined.

Mechanisms responsible for the niche shift of brook charr, Salvelinus fontinalis Mitchill, when living sympatrically with creek chub, Semotilus atromaculatus Mitchill

1984 ◽  
Vol 62 (8) ◽  
pp. 1548-1555 ◽  
Author(s):  
Pierre Magnan ◽  
Gérard J. FitzGerald
Keyword(s):  
Laboratory Experiments ◽  
Salvelinus Fontinalis ◽  
Niche Shift ◽  
Intraspecific Aggression ◽  
Brook Charr ◽  
Semotilus Atromaculatus ◽  
High Level ◽  
Gill Raker ◽  
Creek Chub ◽  
Study Laboratory

When brook charr, Salvelinus fontinalis Mitchill, are in allopatry in oligotrophic Québec lakes, they feed largely on macrobenthic invertebrates. However, when brook charr cooccur with creek chub, Semotilus atromaculatus Mitchill, they feed largely on zooplankton. In the present study, laboratory experiments showed that creek chub were more effective than brook charr in searching for hidden, patchily distributed prey. The searching efficiency of an individual chub feeding in a group was improved through social facilitation. In contrast, the high level of intraspecific aggression observed in brook charr prevents the formation of such feeding groups. In the laboratory, brook charr were able to displace creek chub from the food source because of interspecific aggression. Data are presented showing that chub are morphologically better adapted than charr to feed on benthos (subterminal orientation of the mouth and protrusible premaxillae), while the charr are better adapted than chub to feed on zooplankton (gill raker structure). Differences in feeding behaviour, morphology, and relative abundance between these species appear to be important in the observed niche shift of brook charr in nature.

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