scholarly journals Complete Genome Sequence of a GII.17 Norovirus Isolated from a Rhesus Monkey in China

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Bo Liu ◽  
Yufen Tao ◽  
Chao Li ◽  
Xintong Li ◽  
Jiansheng Liu ◽  
...  
Keyword(s):  
Rhesus Monkey ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Rhesus Monkeys ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Predominant Genotype ◽  
Epidemic Season ◽  
Complete Genomic

The previously silent GII.17 norovirus was found to be the predominant genotype causing major epidemics in China in the 2014–2015 winter epidemic season. We report here the complete genomic sequence of a GII.17 norovirus (mky/GII.17/KM1509/CHN/2015) that infected rhesus monkeys at a monkey farm in southwestern China.

scholarly journals Complete Genome Sequence of Potato Virus T from Bolivia, Obtained from a 33-Year-Old Sample

2018 ◽  
Vol 7 (18) ◽  
Author(s):  
Ian P. Adams ◽  
Jorge Abad ◽  
Cesar E. Fribourg ◽  
Neil Boonham ◽  
Roger A. C. Jones
Keyword(s):  
Genome Sequence ◽  
Potato Virus ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Potato Sample ◽  
Type Isolate ◽  
Andean Potato ◽  
Complete Genomic

We present the complete genomic sequence of a Potato virus T (PVT) isolate originally obtained from a Bolivian potato sample collected in 1976, and we compare it with the genome of the PVT type isolate from Peru. There is an 81% nucleotide identity between the two genomes of this Andean potato virus.

scholarly journals Complete Genomic Sequence of Dengue Virus Serotype 4 Isolated from Plasma Collected from a Haitian Child in 2014

2017 ◽  
Vol 5 (40) ◽  
Author(s):  
Maha A. Elbadry ◽  
Sarah K. White ◽  
Julia C. Loeb ◽  
Massimiliano S. Tagliamonte ◽  
Marco Salemi ◽  
...  
Keyword(s):  
South America ◽  
Dengue Virus ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Virus Serotype ◽  
Genotype Ii ◽  
Complete Genomic

ABSTRACT While data are limited, there is increasing evidence that infections by dengue viruses are endemic in Haiti. In 2014, an outbreak caused by dengue virus 4 (DENV-4) followed a chikungunya fever outbreak. We present here the complete genome sequence of one isolate grouped within the genotype II South America and Caribbean DENV-4 clades.

scholarly journals Complete Genome Sequence of Porcine Parvovirus 2 Recovered from Swine Sera

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
F. S. Campos ◽  
M. Kluge ◽  
A. C. Franco ◽  
A. Giongo ◽  
F. P. Valdez ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Genome Sequence ◽  
North American ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Porcine Parvovirus ◽  
Complete Genomic Sequence ◽  
Metagenome Analysis ◽  
Complete Genomic

A complete genomic sequence of porcine parvovirus 2 (PPV-2) was detected by viral metagenome analysis on swine sera. A phylogenetic analysis of this genome reveals that it is highly similar to previously reported North American PPV-2 genomes. The complete PPV-2 sequence is 5,426 nucleotides long.

scholarly journals Complete Genome Sequence of Vibrio gazogenes ATCC 43942

2017 ◽  
Vol 5 (30) ◽  
Author(s):  
Phani M. Gummadidala ◽  
Michael E. Holder ◽  
Jacqueline L. O’Brien ◽  
Nadim J. Ajami ◽  
Joseph F. Petrosino ◽  
...  
Keyword(s):  
Knowledge Base ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Content Type ◽  
Complete Genomic

ABSTRACT Vibrio gazogenes ATCC 43942 has the potential to synthesize a plethora of metabolites which are of clinical and agricultural significance in response to environmental triggers. The complete genomic sequence of Vibrio gazogenes ATCC 43942 is reported herein, contributing to the knowledge base of strains in the Vibrio genus.

scholarly journals Complete Genome Sequence of Lactobacillus curvatus NFH-Km12, Isolated from the Japanese Traditional Fish Fermented Food Kabura-zushi

2018 ◽  
Vol 7 (1) ◽  
Author(s):  
Daisuke Kyoui ◽  
Natsumi Mikami ◽  
Hiroyuki Yamamoto ◽  
Taketo Kawarai ◽  
Hirokazu Ogihara
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Fermented Food ◽  
Complete Genomic Sequence ◽  
Lactobacillus Curvatus ◽  
Content Type ◽  
Complete Genomic

Kabura-zushi is a traditional Japanese fermented food made from yellowtail, rice, salt, and kōji. In this study, the complete genomic sequence of Lactobacillus curvatus NFH-Km12, isolated from this unique food, is reported.

scholarly journals First Complete Genome Sequence of Arracacha virus A Isolated from a 38-Year-Old Sample from Peru

2017 ◽  
Vol 5 (18) ◽  
Author(s):  
Ian P. Adams ◽  
Neil Boonham ◽  
Roger A. C. Jones
Keyword(s):  
Amino Acid ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Mottle Virus ◽  
Complete Genomic Sequence ◽  
Complete Genomic

ABSTRACT We present here the first complete genomic sequence of Arracacha virus A from a Peruvian arracacha sample collected in 1975 and compare it with the genomes of other nepoviruses. Its RNA1 and RNA2 both had greatest amino acid identities with those of the subgroup A nepovirus Melon mild mottle virus.

scholarly journals Complete Genome Sequence of a Severe Acute Respiratory Syndrome-Related Coronavirus from Kenyan Bats

2019 ◽  
Vol 8 (28) ◽  
Author(s):  
Ying Tao ◽  
Suxiang Tong
Keyword(s):  
Severe Acute Respiratory Syndrome ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Rectal Swab ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Content Type ◽  
Related Virus ◽  
Complete Genomic

We identified a strain of betacoronavirus BtKY72/Rhinolophus sp./Kenya/2007 (here BtKY72) from rectal swab samples in Kenyan bats. This paper reports the complete genomic sequence of BtKY72, which is closely related to BtCoV/BM48-31/Bulgaria/2008, a severe acute respiratory syndrome (SARS)-related virus from Rhinolophus bats in Europe.

scholarly journals Complete Genome Sequence of Lymantria dispar multiple nucleopolyhedrovirus Isolated in Southwestern Poland

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Martyna Krejmer-Rabalska ◽  
Lukasz Rabalski ◽  
Iwona Skrzecz ◽  
Boguslaw Szewczyk
Keyword(s):  
Gypsy Moth ◽  
Lymantria Dispar ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Genome Structure ◽  
Reference Sequence ◽  
Complete Genomic Sequence ◽  
Multiple Nucleopolyhedrovirus ◽  
Complete Genomic

We report here the complete genomic sequence of Polish alphabaculovirus isolated from dead gypsy moth caterpillars. Its genome structure and G+C content indicate that it is a Lymantria dispar multiple nucleopolyhedrovirus (LdMNPV) strain which possesses the shortest sequence among eight other (similar to reference sequence AF081810) LdMNPV sequences available in GenBank; it is 159,729 bp long.

scholarly journals Complete Genomic Sequence of Pseudoalteromonas sp. Strain SAO4-4, a Protease-Producing Bacterium Isolated from Seawater of the Atlantic Ocean

2018 ◽  
Vol 6 (22) ◽  
Author(s):  
Bai-Lu Tang ◽  
Jin-Cheng Rong ◽  
Yan-Ru Dang ◽  
Bin-Bin Xie ◽  
Xiu-Lan Chen ◽  
...  
Keyword(s):  
Organic Matter ◽  
Atlantic Ocean ◽  
Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Aquatic Environments ◽  
Complete Genomic Sequence ◽  
Content Type ◽  
Circular Chromosomes ◽  
Complete Genomic

ABSTRACT The complete genome of Pseudoalteromonas sp. strain SAO4-4, a protease-producing bacterium from seawater, is composed of two circular chromosomes and one plasmid. This genome sequence will provide a better understanding of the ecological roles of protease-producing bacteria in the degradation of organic matter in marine aquatic environments.

scholarly journals Complete Genome Sequence ofEscherichia coliER1821R, a Laboratory K-12 Derivative Engineered To Be Deficient in All Methylcytosine and Methyladenine Restriction Systems

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Michael G. Jobling ◽  
Elisabeth A. Raleigh ◽  
Daniel N. Frank
Keyword(s):  
Escherichia Coli ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Laboratory Strain ◽  
Complete Genomic Sequence ◽  
Immigration Control ◽  
K 12 ◽  
Methylation Patterns ◽  
Complete Genomic

We present here the complete genomic sequence of a rifampin-resistant derivative of theEscherichia coliK-12 laboratory strain ER1821, engineered to be deficient in all known restriction systems, making it suitable for generating unbiased libraries from organisms with non-K-12 methylation patterns. The ER1821R genome is most closely related to that of DH1, another popular cloning strain (both derived from MM294), but is deleted for thee14prophage (McrA-) and the immigration control (McrBC-EcoKI R-M-Mrr-) loci.

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