scholarly journals Genome Sequence of a Burkholderia pseudomallei Clinical Isolate from a Patient with Community-Acquired Pneumonia and Septicemia

2015 ◽  
Vol 3 (4) ◽  
Author(s):  
Chiranjay Mukhopadhyay ◽  
K. E. Vandana ◽  
T. A. K. Chaitanya ◽  
Tushar Shaw ◽  
H. Vinod Bhat ◽  
...  
Keyword(s):  
Diabetic Patient ◽  
Clinical Isolate ◽  
Genome Sequence ◽  
Causative Agent ◽  
Noncoding Rna ◽  
Burkholderia Pseudomallei ◽  
Draft Genome ◽  
Community Acquired Pneumonia ◽  
Southern India ◽  
Coding Sequences

Here, we report the draft genome sequence of Burkholderia pseudomallei CM_Manipal, the causative agent of melioidosis isolated from a diabetic patient in Manipal, southern India. The draft genome consists of 107 contigs and is 7,209,157 bp long. A total of 5,600 coding sequences (CDSs), 60 tRNAs, 12 rRNAs, and one noncoding RNA (ncRNA) were predicted from this assembly.

scholarly journals Draft Genome Sequence of the First South Korean Clinical Isolate of Burkholderia pseudomallei , H0901

2018 ◽  
Vol 6 (17) ◽  
Author(s):  
Yong-Woo Shin ◽  
Myung-Min Choi ◽  
Jeong-Hoon Chun ◽  
Jae-Yon Yu ◽  
Dae-Won Kim ◽  
...  
Keyword(s):  
South Korea ◽  
Clinical Isolate ◽  
Genome Sequence ◽  
Burkholderia Pseudomallei ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
South Korean

ABSTRACT We report here the draft genome sequence of Burkholderia pseudomallei H0901. This strain was isolated in 2003 from the first melioidosis patient in South Korea.

scholarly journals Draft Genome Sequence of a Rare Israeli Clinical Isolate of Burkholderia pseudomallei

2019 ◽  
Vol 8 (19) ◽  
Author(s):  
Ofir Israeli ◽  
Inbar Cohen-Gihon ◽  
Tal Brosh-Nissimov ◽  
Shay Weiss ◽  
Anat Zvi ◽  
...  
Keyword(s):  
Clinical Isolate ◽  
Genome Sequence ◽  
Burkholderia Pseudomallei ◽  
Virulent Strain ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Highly Virulent

We report here the draft genome sequence of Burkholderia pseudomallei MAA2018. This highly virulent strain was isolated in 2018 from the first melioidosis case in Israel associated with recreational travel to Goa, India.

scholarly journals Draft Genome Sequence of Staphylococcus aureus S681, a Tetracycline-Sensitive Livestock-Associated CC398 MRSA Strain

2017 ◽  
Vol 5 (33) ◽  
Author(s):  
Marc J. A. Stevens ◽  
Roger Stephan ◽  
Sophia Johler
Keyword(s):  
Amino Acids ◽  
Staphylococcus Aureus ◽  
Genome Sequence ◽  
Noncoding Rna ◽  
Draft Genome ◽  
Point Mutations ◽  
Draft Genome Sequence ◽  
M Gene ◽  
Coding Sequences ◽  
Content Type

ABSTRACT We present the draft genome sequence of an atypical tetracycline-susceptible livestock-associated methicillin-resistant Staphylococcus aureus (MRSA) strain. It contains 2,817,340 bp and 2,858 coding sequences, including 6 rRNA operons, 56 tRNAs, and 4 noncoding RNA (ncRNA) genes. The strain harbors a tet(M) gene, but 15 point mutations in amino acids are present that likely impair the functionality of TetM.

scholarly journals Draft Genome Sequence of Vibrio parahaemolyticus Strain VP14, Isolated from a Penaeus vannamei Culture Farm

2018 ◽  
Vol 6 (11) ◽  
Author(s):  
Ashok Kumar Jangam ◽  
T. Bhuvaneswari ◽  
A. Navaneeth Krishnan ◽  
Vinaya Kumar Katneni ◽  
Satheesha Avunje ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Vibrio Parahaemolyticus ◽  
Draft Genome ◽  
Gc Content ◽  
Southern India ◽  
Draft Genome Sequence ◽  
Penaeus Vannamei ◽  
Parahaemolyticus Strain ◽  
Coding Sequences ◽  
Content Type

ABSTRACT Here, we report the draft genome sequence of an isolate of Vibrio parahaemolyticus , VP14, recovered from the gut of Penaeus vannamei shrimp farmed in southern India. The genome of VP14 comprised 5,224,046 bp with a GC content of 45.3% and contained 5,326 genes, including 4,972 coding sequences.

scholarly journals Genome Sequence of the Historical Clinical Isolate Burkholderia pseudomallei PHLS 6

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Patrik D’haeseleer ◽  
Shannon L. Johnson ◽  
Karen W. Davenport ◽  
Patrick S. Chain ◽  
Joe Schoeniger ◽  
...  
Keyword(s):  
Clinical Isolate ◽  
Genome Sequence ◽  
Burkholderia Pseudomallei ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Clinical Strain

Here, we present the draft genome sequence of Burkholderia pseudomallei PHLS 6, a virulent clinical strain isolated from a melioidosis patient in Bangladesh in 1960. The draft genome consists of 39 contigs and is 7,322,181 bp long.

scholarly journals Draft Genome Sequence of Bacillus thuringiensis Strain UNMSM10RA, Isolated from Potato Crop Soil in Peru

2020 ◽  
Vol 9 (2) ◽  
Author(s):  
Yolanda Bedsabé Delgado-Silva ◽  
David Tarazona ◽  
Fernando Serna ◽  
Eduardo Juscamayta ◽  
Julio César Chávez-Galarza ◽  
...  
Keyword(s):  
Bacillus Thuringiensis ◽  
Genome Sequence ◽  
Noncoding Rna ◽  
Potato Crop ◽  
Draft Genome ◽  
Rrna Genes ◽  
Trna Genes ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type

The 5.5-Mb genome sequence of Bacillus thuringiensis strain UNMSM10RA, isolated from potato crop soil, is reported in this study. The strain UNMSM10RA contains 5,347 protein-coding sequences, 105 tRNA genes, 15 rRNA genes, and 5 noncoding RNA (ncRNA) genes, with an average G+C content of 35.1%.

scholarly journals Draft Genome Sequence of the Vancomycin-Resistant Clinical Isolate Staphylococcus aureus VRS3b

2017 ◽  
Vol 5 (22) ◽  
Author(s):  
Suresh Panthee ◽  
Atmika Paudel ◽  
Hiroshi Hamamoto ◽  
Kazuhisa Sekimizu
Keyword(s):  
Staphylococcus Aureus ◽  
Clinical Isolate ◽  
Genome Sequence ◽  
Resistant Strain ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Coding Sequences ◽  
Content Type ◽  
Vancomycin Resistant

ABSTRACT We report here the draft genome sequence of the vancomycin-resistant strain Staphylococcus aureus VRS3b. The 2.8-Mb genome, assembled into 46 contigs, harbored 2,915 putative coding sequences. The G+C content of the genome was 32.7%.

scholarly journals Correction for Israeli et al., “Draft Genome Sequence of a Rare Israeli Clinical Isolate of Burkholderia pseudomallei”

2019 ◽  
Vol 8 (40) ◽  
Author(s):  
Ofir Israeli ◽  
Inbar Cohen-Gihon ◽  
Tal Brosh-Nissimov ◽  
Shay Weiss ◽  
Anat Zvi ◽  
...  
Keyword(s):  
Clinical Isolate ◽  
Genome Sequence ◽  
Burkholderia Pseudomallei ◽  
Draft Genome ◽  
Draft Genome Sequence

scholarly journals Draft Genome Sequence of a PathogenicVibrio vulnificusStrain Isolated in Brazil

2018 ◽  
Vol 6 (7) ◽  
Author(s):  
Monique Ribeiro Tiba-Casas ◽  
Eneida Gonçalves Lemes-Marques ◽  
Elisabete Aparecida Almeida ◽  
Flávia Barrosa Soares ◽  
Carlos Henrique Camargo
Keyword(s):  
Diabetic Patient ◽  
Genome Sequence ◽  
Vibrio Vulnificus ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Coding Sequences

ABSTRACTWe describe the draft genome sequence of the clinicalVibrio vulnificusstrain 03_7315, isolated in 2016 from the blood of a diabetic patient who died of septicemia after ingestion of seafood. The draft genome, with 4,755,588 bp covering two chromosomes, presented 4,434 genes, 4,213 coding sequences, and 117 pseudogenes.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

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