scholarly journals Draft Genome Sequence of Rhodococcus ruber Strain P25, an Active Polychlorinated Biphenyl Degrader

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Ekaterina S. Shumkova ◽  
Björn E. Olsson ◽  
Anna V. Kudryavtseva ◽  
Elena G. Plotnikova
Keyword(s):  
Polychlorinated Biphenyls ◽  
Genome Sequence ◽  
Aromatic Compounds ◽  
Polychlorinated Biphenyl ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rhodococcus Ruber ◽  
The City ◽  
Halogenated Aromatic Compounds

We report the 5,728,255-bp draft genome sequence of Rhodococcus ruber P25, isolated from a soil polluted with halogenated aromatic compounds in the city of Perm, Russia. The strain degrades polychlorinated biphenyls and a broad range of aromatic compounds. It possesses genes that mediate the degradation of biphenyls/polychlorinated biphenyls, naphthalene, and monoaromatic compounds.

scholarly journals Draft Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Pseudomonas stutzeri KF716 (NBRC 110668)

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Jun Hirose ◽  
Atsushi Yamazoe ◽  
Akira Hosoyama ◽  
Nobutada Kimura ◽  
Hikaru Suenaga ◽  
...  
Keyword(s):  
Polychlorinated Biphenyls ◽  
Genome Sequence ◽  
Polychlorinated Biphenyl ◽  
Draft Genome ◽  
Pseudomonas Stutzeri ◽  
Sole Source ◽  
Draft Genome Sequence ◽  
Degrading Bacterium

Pseudomonas stutzeri KF716 (NBRC 110668) utilizes biphenyl as a sole source of carbon and energy and degrades polychlorinated biphenyls. Here, we report the first draft genome sequence of a biphenyl-degrading strain of the species P. stutzeri .

scholarly journals Draft Genome Sequence of the Polychlorinated Biphenyl-Degrading Bacterium Comamonas testosteroni KF712 (NBRC 110673)

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Jun Hirose ◽  
Atsushi Yamazoe ◽  
Akira Hosoyama ◽  
Nobutada Kimura ◽  
Hikaru Suenaga ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Aromatic Compounds ◽  
Polychlorinated Biphenyl ◽  
Draft Genome ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Comamonas Testosteroni ◽  
Degrading Bacterium

We present a 5.89-Mb draft genome sequence of Comamonas testosteroni KF712 (NBRC 110673), a polychlorinated biphenyl degrader. The genome sequence clarified that KF712 harbors the gene clusters coding for the catabolism of biphenyl and at least seven other aromatic compounds.

scholarly journals Draft Genome Sequence of Enterobacter sp. Strain A8, a Carbazole-Degrading Bacterium

2019 ◽  
Vol 8 (18) ◽  
Author(s):  
Nidhi Gupta ◽  
Kelly A. Skinner ◽  
Samiya Khan ◽  
Janaka N. Edirisinghe ◽  
Christopher S. Henry
Keyword(s):  
Genome Sequence ◽  
Aromatic Compounds ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Degrading Bacterium ◽  
Insight Into

We present here the draft genome sequence of a carbazole-degrading Enterobacter species. The draft genome sequence will provide insight into various genes involved in the degradation of carbazole and other related aromatic compounds.

scholarly journals Draft Genome Sequence of the Steroid Degrader Rhodococcus ruber Strain Chol-4

2013 ◽  
Vol 1 (3) ◽  
Author(s):  
L. Fernandez de las Heras ◽  
S. Alonso ◽  
A. de la Vega de Leon ◽  
D. Xavier ◽  
J. Perera ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rhodococcus Ruber

scholarly journals Draft Genome Sequence of Streptomyces sp. Strain NL15-2K, a Degrader of Lignin-Derived Aromatic Compounds, Isolated from Forest Soil

2019 ◽  
Vol 8 (10) ◽  
Author(s):  
Motohiro Nishimura ◽  
Susumu Kawakami ◽  
Hideaki Otsuka
Keyword(s):  
Soil Sample ◽  
Forest Soil ◽  
Genome Sequence ◽  
Aromatic Compounds ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Streptomyces Sp

Streptomyces sp. strain NL15-2K is a degrader of lignin-derived aromatic compounds and was isolated from a forest soil sample.

scholarly journals Draft Genome Sequence of Acinetobacter baumannii IITR88, a Bacterium Degrading Indoles and Other Aromatic Compounds

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Raj Kumar Regar ◽  
Vivek Kumar Gaur ◽  
Gayatri Mishra ◽  
Sudhir Jadhao ◽  
Mohan Kamthan ◽  
...  
Keyword(s):  
Acinetobacter Baumannii ◽  
Genome Sequence ◽  
Aromatic Compounds ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Coding Regions ◽  
Degrading Bacterium ◽  
Bhagirathi River

Here, we report the 4.16-Mb draft genome sequence of an indole-degrading bacterium, Acinetobacter baumannii IITR88, isolated from the Bhagirathi river in India. A total of 4,069 coding regions (CDSs), 3 rRNAs, and 52 tRNAs were predicted. Genes for the degradation of indoles, phenylacetaldehyde, anthranilate, and several other aromatic compounds were present.

scholarly journals Draft Genome Sequence ofSphingorhabdussp. Strain EL138, a Metabolically Versatile Alphaproteobacterium Isolated from the Gorgonian CoralEunicella labiata

2018 ◽  
Vol 6 (9) ◽  
Author(s):  
Sandra Godinho Silva ◽  
Asunción Lago-Lestón ◽  
Rodrigo Costa ◽  
Tina Keller-Costa
Keyword(s):  
Heavy Metals ◽  
Genome Sequence ◽  
Aromatic Compounds ◽  
Draft Genome ◽  
Polycyclic Aromatic Compounds ◽  
Draft Genome Sequence ◽  
Gorgonian Coral ◽  
Content Type ◽  
Polycyclic Aromatic

ABSTRACTHere, we report the draft genome sequence ofSphingorhabdussp. strain EL138, an alphaproteobacterium that shows potential to degrade polycyclic aromatic compounds and to cope with various heavy metals and antibiotics. Moreover, the strain, isolated from the gorgonian coralEunicella labiata, possesses several genes involved in the biosynthesis of polyphosphates, polyketides, and terpenoids.

scholarly journals Draft Genome Sequence of Rhodococcus ruber Strain BKS 20-38

2013 ◽  
Vol 1 (2) ◽  
Author(s):  
M. Bala ◽  
S. Kumar ◽  
G. P. S. Raghava ◽  
S. Mayilraj
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Rhodococcus Ruber

scholarly journals Draft Genome Sequence of Brevibacillus sp. Strain LEMMJ03, Isolated from an Antarctic Volcano

2019 ◽  
Vol 8 (40) ◽  
Author(s):  
Júnia Schultz ◽  
René Kallies ◽  
Ulisses Nunes da Rocha ◽  
Alexandre Soares Rosado
Keyword(s):  
Genome Sequence ◽  
Aromatic Compounds ◽  
Draft Genome ◽  
Noncoding Rnas ◽  
Draft Genome Sequence ◽  
Deception Island ◽  
Coding Sequences ◽  
Content Type

Here, we announce the draft genome sequence of Brevibacillus sp. strain LEMMJ03, isolated from Whalers Bay sediment (Deception Island, Antarctica). In total, 4,500 coding sequences (CDS), among those 102 coding for tRNAs and 5 for noncoding RNAs (ncRNAs), were predicted from the 4.64-Mb genome. Predicted functions were for bacteriocin and degradation of aromatic compounds.

scholarly journals Draft Genome Sequence of Pseudomonas pachastrellae Strain CCUG 46540T, a Deep-Sea Bacterium

2017 ◽  
Vol 5 (14) ◽  
Author(s):  
Margarita Gomila ◽  
Magdalena Mulet ◽  
Jorge Lalucat ◽  
Elena García-Valdés
Keyword(s):  
Genome Sequence ◽  
Aromatic Compounds ◽  
Deep Sea ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Philippine Sea

ABSTRACT Pseudomonas pachastrellae strain CCUG 46540T (KMM 330T) was isolated from a deep-sea sponge specimen collected in the Philippine Sea at a depth of 750 m. The draft genome has an estimated size of 4.0 Mb, exhibits a G+C content of 61.2 mol%, and is predicted to encode 3,592 proteins, including pathways for the degradation of aromatic compounds.

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