scholarly journals Genome Sequence of the Poly-3-Hydroxybutyrate Producer Clostridium acetireducens DSM 10703

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Sebastian Flüchter ◽  
Anja Poehlein ◽  
Bettina Schiel-Bengelsdorf ◽  
Rolf Daniel ◽  
Peter Dürre
Keyword(s):  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Strictly Anaerobic ◽  
Circular Chromosome ◽  
Protein Encoding ◽  
Encoding Genes

Here, we report the genome sequence of Clostridium acetireducens (DSM 10703 T ), a strictly anaerobic bacterium capable of fermenting acetate and leucine to butyrate, isovalerate, and poly-3-hydroxybutyrate. The draft genome consists of a circular chromosome with a size of 2.4 Mb and harbors 2,239 predicted protein-encoding genes.

scholarly journals Genome Sequence of Creatinine-Fermenting Tissierella creatinophila Strain KRE 4T (DSM 6911)

2017 ◽  
Vol 5 (12) ◽  
Author(s):  
Heiko Nacke ◽  
Rolf Daniel ◽  
Anja Poehlein
Keyword(s):  
Sewage Sludge ◽  
Genome Sequence ◽  
Draft Genome ◽  
Strictly Anaerobic ◽  
Circular Chromosome ◽  
Content Type ◽  
Protein Encoding ◽  
Encoding Genes

ABSTRACT Tissierella creatinophila strain KRE 4T (DSM 6911) is a strictly anaerobic, creatinine-fermenting, and creatine-fermenting organism, which has been isolated from sewage sludge. The draft genome consists of one circular chromosome (2.5 Mb) and harbors 2,533 predicted protein-encoding genes.

scholarly journals Genome Sequence of Uric Acid-Fermenting Eubacterium angustum DSM 1989T (MK-1)

2017 ◽  
Vol 5 (2) ◽  
Author(s):  
Anja Poehlein ◽  
Michael Y. Galperin ◽  
Jan R. Andreesen ◽  
Rolf Daniel
Keyword(s):  
Uric Acid ◽  
Sewage Sludge ◽  
Genome Sequence ◽  
Draft Genome ◽  
Strictly Anaerobic ◽  
Circular Chromosome ◽  
Content Type ◽  
Protein Encoding ◽  
Encoding Genes

ABSTRACT Eubacterium angustum DSM 1989T (MK-1) is a strictly anaerobic and uric acid-, xanthine-, and guanine-fermenting organism isolated from sewage sludge. The draft genome consists of one circular chromosome (2.4 Mb) and harbors 2,397 predicted protein-encoding genes.

scholarly journals Draft Genome Sequence of the Hydrogenogenic Carboxydotroph Moorella stamsii DSM 26271

2018 ◽  
Vol 6 (18) ◽  
Author(s):  
Anja Poehlein ◽  
Tim Böer ◽  
Kerrin Steensen ◽  
Rolf Daniel
Keyword(s):  
Carbon Monoxide ◽  
Genome Sequence ◽  
Anaerobic Bacterium ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Obligate Anaerobic ◽  
Protein Encoding ◽  
Encoding Genes

ABSTRACT The spore-forming, thermophilic, and obligate anaerobic bacterium Moorella stamsii was isolated from digester sludge. Apart from its ability to use carbon monoxide for growth, M. stamsii harbors several enzymes for the use of different sugars. The draft genome has a size of 3,329 Mb and contains 3,306 predicted protein-encoding genes.

scholarly journals Genome Sequence of the Facultative AnaerobeOerskovia enterophilaDFA-19 (DSM 43852T)

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Vanessa Jag ◽  
Anja Poehlein ◽  
Frank R. Bengelsdorf ◽  
Rolf Daniel ◽  
Peter Dürre
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Soil Bacterium ◽  
Draft Genome Sequence ◽  
Facultative Anaerobe ◽  
Circular Chromosome ◽  
Protein Encoding ◽  
Encoding Genes

Here, we report the draft genome sequence ofOerskovia enterophilaDFA-19 (DSM 43852T), a facultative anaerobe soil bacterium, which was originally isolated from millipede feces and first described asPromicromonospora enterophila. The genome consists of a circular chromosome comprising approximately 4.65 Mb and 4,044 predicted protein-encoding genes.

scholarly journals First Insight into the Genome Sequence of Clostridium liquoris DSM 100320, a Butyrate- and Ethanol-Producing Bacterium

2018 ◽  
Vol 6 (18) ◽  
Author(s):  
Anja Poehlein ◽  
Hannes Neubauer ◽  
Philipp Niemeyer ◽  
Rolf Daniel
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Strictly Anaerobic ◽  
Gram Positive ◽  
Fermentation Products ◽  
Content Type ◽  
Protein Encoding ◽  
Encoding Genes ◽  
Insight Into

ABSTRACT Clostridium liquoris is a strictly anaerobic, Gram-positive, nonmotile, spore-forming, rod-shaped bacterium. The major fermentation products from glucose are ethanol and butyrate. C. liquoris was isolated from a 20-year-old liquor fermentation pit. The draft genome sequence consists of a chromosome (2.892 Mb) harboring 2,788 predicted protein-encoding genes.

scholarly journals Draft Genome Sequence of the Butanoic Acid-Producing Bacterium Clostridium luticellarii DSM 29923, Used for Strong Aromatic Chinese Liquor Production

2018 ◽  
Vol 6 (18) ◽  
Author(s):  
Anja Poehlein ◽  
Rica Bremekamp ◽  
Veronika Theresa Lutz ◽  
Lisa Maria Schulz ◽  
Rolf Daniel
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Strictly Anaerobic ◽  
Butanoic Acid ◽  
Content Type ◽  
Protein Encoding ◽  
Strong Aromatic Chinese Liquor ◽  
Curved Rod ◽  
Encoding Genes

ABSTRACT The strictly anaerobic, Gram-positive bacterium Clostridium luticellarii , which has straight or slightly curved rod-shaped cells, polar endospores, and peritrichous flagella, is used for the production of strong aromatic Chinese liquors. C. luticellarii is able to produce butanoic acid. The draft genome sequence consists of 3.757 Mbp, including 3,632 predicted protein-encoding genes.

scholarly journals Draft Genome Sequence of the Axenic Strain Phormidesmispriestleyi ULC007, a Cyanobacterium Isolated from Lake Bruehwiler (Larsemann Hills, Antarctica)

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Yannick Lara ◽  
Benoit Durieu ◽  
Luc Cornet ◽  
Olivier Verlaine ◽  
Rosmarie Rippka ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Axenic Strain ◽  
Larsemann Hills ◽  
Freshwater Cyanobacterium ◽  
Protein Encoding ◽  
Encoding Genes

ABSTRACT Phormidesmis priestleyi ULC007 is an Antarctic freshwater cyanobacterium. Its draft genome is 5,684,389 bp long. It contains a total of 5,604 protein-encoding genes, of which 22.2% have no clear homologues in known genomes. To date, this draft genome is the first one ever determined for an axenic cyanobacterium from Antarctica.

scholarly journals Draft Genome Sequence of Ezakiella peruensis Strain M6.X2, a Human Gut Gram-Positive Anaerobic Coccus

2018 ◽  
Vol 6 (9) ◽  
pp. e01487-17
Author(s):  
Awa Diop ◽  
Khoudia Diop ◽  
Enora Tomei ◽  
Didier Raoult ◽  
Florence Fenollar ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Antibiotic Resistance Genes ◽  
Draft Genome Sequence ◽  
Human Gut ◽  
Gene Encoding ◽  
Content Type ◽  
Protein Encoding ◽  
Short Palindromic Repeat ◽  
Encoding Genes

ABSTRACT We report here the draft genome sequence of Ezakiella peruensis strain M6.X2T. The draft genome is 1,672,788 bp long and harbors 1,589 predicted protein-encoding genes, including 26 antibiotic resistance genes with 1 gene encoding vancomycin resistance. The genome also exhibits 1 clustered regularly interspaced short palindromic repeat region and 333 genes acquired by horizontal gene transfer.

scholarly journals Draft Genome Sequence of Massilia sp. Strain MC02, Isolated from a Sandy Loam Maize Soil

2019 ◽  
Vol 8 (32) ◽  
Author(s):  
Rachel Raths ◽  
Vincent Peta ◽  
Heike Bücking
Keyword(s):  
Genome Sequence ◽  
Sandy Loam ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Trna Genes ◽  
Content Type ◽  
Protein Encoding ◽  
Encoding Genes

From farmed corn soil in California, we isolated and sequenced a new member of the genus Massilia, Massilia sp. strain MC02. Massilia sp. MC02 has an assembled draft genome of 5,023,356 bp with a total of 4,790 protein-encoding genes and 3,028 predicted proteins, 47 tRNA genes, and 2 rRNA operons.

scholarly journals Draft Genome Sequence of the Intimin-Positive Enteropathogenic Escherichia albertii Strain MBT-EA1, Isolated from Lettuce

2018 ◽  
Vol 6 (15) ◽  
pp. e00255-18
Author(s):  
Gregor Fiedler ◽  
Erik Brinks ◽  
Christina Böhnlein ◽  
Gyu-Sung Cho ◽  
Sabrina Koberg ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Genome Size ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Protein Encoding ◽  
Encoding Genes

ABSTRACT The genome of the intimin (eae)-harboring Escherichia albertii strain MBT-EA1, isolated from lettuce in Germany, was sequenced. Sequence analysis showed the assembled draft genome size to be 4,560,948 bp, containing a predicted total of 4,414 protein-encoding genes, 11 rRNAs, and 82 tRNAs. Furthermore, three plasmid sequences were found.

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