scholarly journals Complete Genome Sequence of Thermoanaerobacterium sp. Strain RBIITD, a Butyrate- and Butanol-Producing Thermophile

2018 ◽  
Vol 6 (2) ◽  
Author(s):  
Ranjita Biswas ◽  
Marcel Huntemann ◽  
Alicia Clum ◽  
Manoj Pillay ◽  
Krishnaveni Palaniappan ◽  
...  
Keyword(s):  
Growth Medium ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Plant Biomass ◽  
Gc Content ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Fermentation Product ◽  
Anaerobic Chamber

ABSTRACT Thermoanaerobacterium sp. strain RBIITD was isolated from contaminated rich growth medium at 55°C in an anaerobic chamber. It primarily produces butyrate as a fermentation product from plant biomass-derived sugars. The whole-genome sequence of the strain is 3.4 Mbp, with 3,444 genes and 32.48% GC content.

scholarly journals Whole-Genome Sequence of Erwinia persicina B64, Which Causes Pink Soft Rot in Onions

2019 ◽  
Vol 8 (1) ◽  
Author(s):  
Heejung Cho ◽  
Ji Yeon Park ◽  
Yong Ki Kim ◽  
Seong-Han Sohn ◽  
Dong Suk Park ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Cold Storage ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Soft Rot ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Erwinia Persicina

Erwinia persicina B64 was isolated from rotten onions in cold-storage facilities. Here, we report the complete genome sequence of E. persicina B64, which contains 5,070,450 bp with 55.17% GC content. The genome of this isolate is composed of one chromosome and two plasmids.

scholarly journals Complete Genome Sequence of the Arcobacter skirrowii Type Strain LMG 6621

2018 ◽  
Vol 7 (17) ◽  
Author(s):  
William G. Miller ◽  
Emma Yee
Keyword(s):  
Genome Sequence ◽  
Fecal Sample ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
The United Kingdom ◽  
Veterinary Importance

Arcobacter skirrowii is a species of veterinary importance, originally recovered from the feces, aborted fetuses, and preputial fluids of livestock. We present here the whole-genome sequence of the A. skirrowii type strain LMG 6621 (= 449/80T = CCUG 10374T), isolated in the United Kingdom from a lamb diarrheal fecal sample.

scholarly journals Complete Genome Sequence of Matlo Bat Lyssavirus

2021 ◽  
Vol 10 (20) ◽  
Author(s):  
Colyn S. Grobler ◽  
Jessica Coertse ◽  
Wanda Markotter
Keyword(s):  
South Africa ◽  
Next Generation Sequencing ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Novel Species ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Sequencing Technologies ◽  
Generation Sequencing

ABSTRACT The genus Lyssavirus includes rabies virus as well as multiple diverse and recently described novel species. Using next-generation sequencing technologies, we have obtained the whole-genome sequence of Matlo bat lyssavirus, which was isolated from a Natal long-fingered bat (Miniopterus natalensis) in South Africa.

scholarly journals Whole-Genome Sequence of Multidrug-ResistantPseudomonas aeruginosaStrain BAMCPA07-48, Isolated from a Combat Injury Wound

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Fatemeh Sanjar ◽  
S. L. Rajasekhar Karna ◽  
Tsute Chen ◽  
Ping Chen ◽  
Johnathan J. Abercrombie ◽  
...  
Keyword(s):  
Pseudomonas Aeruginosa ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Valuable Resource ◽  
Combat Injury ◽  
Pathogen Surveillance

We report here the complete genome sequence ofPseudomonas aeruginosastrain BAMCPA07-48, isolated from a combat injury wound. The closed genome sequence of this isolate is a valuable resource for pathogenome characterization ofP. aeruginosaassociated with wounds, which will aid in the development of a higher-resolution phylogenomic framework for molecular-guided pathogen-surveillance.

scholarly journals Whole-Genome Sequence of a Beak and Feather Disease Virus Isolate from a Fledgling Red-Capped Parrot ( Purpureicephalus spurius )

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Shubhagata Das ◽  
Sarker Subir ◽  
Jade K. Forwood ◽  
Seyed A. Ghorashi ◽  
Shane R. Raidal
Keyword(s):  
Disease Virus ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virus Isolate ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Novel Host ◽  
Feather Disease Virus

The complete genome sequence of beak and feather disease virus (BFDV) from a fledgling red-capped parrot ( Purpureicephalus spurius ) was assembled and characterized. The genome consists of 1,995 nucleotides and encodes two major proteins in opposing directions. This is the first evidence of BFDV infectivity and a complete genome sequence for this novel host.

scholarly journals Complete Genome Sequence of Lactobacillus reuteri PNW1, a Promising Probiotic Candidate

2019 ◽  
Vol 8 (8) ◽  
Author(s):  
Kazeem A. Alayande ◽  
Olayinka A. Aiyegoro ◽  
Collins N. Ateba
Keyword(s):  
South African ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Lactobacillus Reuteri ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Weaned Piglets ◽  
Content Type

This study reports the whole-genome sequence of Lactobacillus reuteri PNW1 isolated from gastrointestinal tracts of weaned piglets of the indigenous South African Windsnyer pig breed. A total of 5.2 GB data comprising 8,209,104 paired-end reads were generated.

scholarly journals Whole-Genome Sequence of the Cyanobacterium Synechococcus sp. Strain WH 8101

2020 ◽  
Vol 9 (8) ◽  
Author(s):  
Marcia F. Marston ◽  
Shawn W. Polson
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Islands ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Coastal Environments ◽  
Host Interactions ◽  
Synechococcus Sp ◽  
Globally Distributed

Synechococcus spp. are unicellular cyanobacteria that are globally distributed and are important primary producers in marine coastal environments. Here, we report the complete genome sequence of Synechococcus sp. strain WH 8101 and identify genomic islands that may play a role in virus-host interactions.

scholarly journals Whole-Genome Sequence of Rickettsia parkeri Strain Atlantic Rainforest, Isolated from a Colombian Tick

2019 ◽  
Vol 8 (39) ◽  
Author(s):  
Andrés F. Londoño ◽  
Nicole L. Mendell ◽  
Gustavo A. Valbuena ◽  
Andrew L. Routh ◽  
Thomas G. Wood ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Atlantic Rainforest ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Rickettsia Parkeri ◽  
Content Type ◽  
Amblyomma Ovale

Rickettsia parkeri is classified as a member of the alphaproteobacterial microorganisms, genus Rickettsia. Here, we report the complete genome sequence of Rickettsia parkeri strain Atlantic Rainforest, which was isolated from an Amblyomma ovale tick collected in the municipality of Necoclí, Colombia.

scholarly journals Complete Genome Sequence of Streptococcus agalactiae GD201008-001, Isolated in China from Tilapia with Meningoencephalitis

2012 ◽  
Vol 194 (23) ◽  
pp. 6653-6653 ◽  
Author(s):  
Guangjin Liu ◽  
Wei Zhang ◽  
Chengping Lu
Keyword(s):  
Genome Sequence ◽  
Streptococcus Agalactiae ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genetic Basis ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type ◽  
Host Tropism

ABSTRACTThis work describes a whole-genome sequence ofStreptococcus agalactiaestrain GD201008-001, a pathogen causing meningoencephalitis in cultural tilapia in China. The genome sequence provides opportunities to understand the piscine GBS pathogenicity and its genetic basis associated with host tropism.

scholarly journals Complete Genome Sequence of the Facultative Methylotroph Methylobacterium extorquens TK 0001 Isolated from Soil in Poland

2018 ◽  
Vol 6 (8) ◽  
Author(s):  
Sophia Belkhelfa ◽  
Karine Labadie ◽  
Corinne Cruaud ◽  
Jean-Marc Aury ◽  
David Roche ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Methylobacterium Extorquens ◽  
Facultative Methylotroph

ABSTRACT Methylobacterium extorquens TK 0001 (DSM 1337, ATCC 43645) is an aerobic pink-pigmented facultative methylotrophic alphaproteobacterium isolated from soil in Poland. Here, we report the whole-genome sequence and annotation of this organism, which consists of a single 5.71-Mb chromosome.

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