scholarly journals BASE COMPOSITION OF DEOXYRIBONUCLEIC ACID OF MARINE AND NONMARINE VIBRIOS DEDUCED FROM BUOYANT-DENSITY MEASUREMENTS IN CESIUM CHLORIDE

1964 ◽  
Vol 88 (6) ◽  
pp. 1816-1817 ◽  
Author(s):  
R. R. Colwell ◽  
M. Mandel
1966 ◽  
Vol 12 (6) ◽  
pp. 1099-1103 ◽  
Author(s):  
R. R. Colwell ◽  
R. V. Citarella ◽  
P. K. Chen

A marine bacterium, NCMB 397, host strain for bacteriophages NCMB 384 and 385, has been subjected to taxonoinic analysis. Overall base composition of the highly purified deoxyribonucleic acid was determined and found to be 37 moles % guanine + cytosine. The phenetic and nucleic acid data suggest significant relationship of this strain and members of the genus Cytophaga. A description of Cytophaga marinoflava n. sp. is presented.


1968 ◽  
Vol 14 (2) ◽  
pp. 165-171 ◽  
Author(s):  
R. R. Colwell ◽  
E. J. Smith ◽  
G. B. Chapman

The bacterial mucopolysaccharide of a Gram-negative bacterium, Georgetown strain COC-21, includes a hexosamine component, D-quinovosamine. The bacterium has been identified and classified as Achromobacter georgiopolitanum n. sp. and a description of the organism is given. The overall deoxyribonucleic acid base composition, determined by buoyant density measurements in cesium chloride, is 41 moles %. Electron micrographs of ultrathin sections reveal a double-layered cell wall structure typical of the Gram-negative bacteria.


1970 ◽  
Vol 101 (2) ◽  
pp. 333-338 ◽  
Author(s):  
M. Mandel ◽  
Levi Igambi ◽  
Janet Bergendahl ◽  
M. L. Dodson ◽  
E. Scheltgen

1975 ◽  
Vol 67 (2) ◽  
pp. 378-399 ◽  
Author(s):  
D L Fouts ◽  
J E Manning ◽  
D R Wolstenholme

The protozoa Crithidia and Trypanosoma contain within a mitochondrion a mass of DNA known as kinetoplast DNA (kDNA) which consists mainly of an association of thousands of small circular molecules of similar size held together by topological interlocking. Using kDNA from Crithidia acanthocephali, Crithidia luciliae, and Trypanosoma lewisi, physicochemical studies have been carried out with intact associations and with fractions of covalently closed single circular molecules, and of open single circular and unit length linear molecules obtained from kDNA associations by sonication, sucrose sedimentation, and cesium chloride-ethidium bromide equilibrium centrifugation. Buoyant density analyses failed to provide evidence for base composition heterogeneity among kDNA molecules within a species. The complementary nucleotide strands of kDNA molecules of all three species had distinct buoyant densities in both alkaline and neutral cesium chloride. For C. acanthocephali kDNA, these buoyant density differences were shown to be a reflection of differences in base composition between the complementary nucleotide strands. The molar ratios of adenine: thymine:guanine:cytosine, obtained from deoxyribonucleotide analyses were 16.8:41.0:28.1:14.1 for the heavy strand and 41.6:16.6:12.8:29.0 for the light strand. Covalently closed single circular molecules of C. acanthocephali (as well as intact kDNA associations of C. acanthocephali and T. lewisi) formed a single band in alkaline cesium chloride gradients, indicating their component nucleotide strands to be alkaline insensitive. Data from buoyant density, base composition, and thermal melting analyses suggested that minor bases are either rare or absent in Crithidia kDNA. The kinetics of renaturation of 32P labeled C. acanthocephali kDNA measured using hydroxyapatite chromatography were consistent with at least 70% of the circular molecules of this DNA having the same nucleotide sequence. Evidence for sequence homologies among the kDNAs of all three species was obtained from buoyant density analyses of DNA in annealed mixtures containing one component kDNA strand from each of two species.


Biopolymers ◽  
1971 ◽  
Vol 10 (12) ◽  
pp. 2615-2617 ◽  
Author(s):  
William Bauer ◽  
Fred Prindaville ◽  
Jerome Vinograd

1970 ◽  
Vol 47 (3) ◽  
pp. 689-702 ◽  
Author(s):  
Hartmut C. Renger ◽  
David R. Wolstenholme

Cesium chloride centrifugation of DNA extracted from cells of blood strain Trypanosoma lewisi revealed a main band, ρ = 1.707, a light satellite, ρ = 1.699, and a heavy satellite, ρ = 1.721. Culture strain T. lewisi DNA comprised only a main band, ρ = 1.711, and a light satellite, ρ = 1.699. DNA isolated from DNase-treated kinetoplast fractions of both the blood and culture strains consisted of only the light satellite DNA. Electron microscope examination of rotary shadowed preparations of lysates revealed that DNA from kinetoplast fractions was mainly in the form of single 0.4 µ circular molecules and large masses of 0.4 µ interlocked circles with which longer, often noncircular molecules were associated. The 0.4 µ circular molecules were mainly in the covalently closed form: they showed a high degree of resistance to thermal denaturation which was lost following sonication; and they banded at a greater density than linear DNA in cesium chloride-ethidium bromide gradients. Interpretation of the large masses of DNA as comprising interlocked covalently closed 0.4 µ circles was supported by the findings that they banded with single circular molecules in cesium chloride-ethidium bromide gradients, and following breakage of some circles by mild sonication, they disappeared and were replaced by molecules made up of low numbers of apparently interlocked 0.4 µ circles. When culture strain cells were grown in the presence of either ethidium bromide or acriflavin, there was a loss of stainable kinetoplast DNA in cytological preparations. There was a parallel loss of light satellite and of circular molecules from DNA extracted from these cells.


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