scholarly journals Forensic botany and forensic chemistry working together: application of plant DNA barcoding as a complement to forensic chemistry—a case study in Brazil

Genome ◽  
2019 ◽  
Vol 62 (1) ◽  
pp. 11-18 ◽  
Author(s):  
Renato T.F. Paranaiba ◽  
Carlos B.V. Carvalho ◽  
Jorge M. Freitas ◽  
Levy H. Fassio ◽  
Élvio D. Botelho ◽  
...  

Recently, Brazilian Federal Police used forensic chemistry and forensic botany techniques on a case. Two packets containing fragmented plant matter were seized and sent for forensic analysis. Forensic chemistry, the gold standard for evaluating plant material suspected to contain illicit substances, did not find illicit materials. Gas chromatography coupled mass spectrometry (GC-MS) identified thujone in the botanical material. Thujone is a chemical compound naturally found in many plant species, notably Artemisia absinthium. Because doubt remained, we next used plant DNA barcoding methods. Total DNA from plant tissue fragments was extracted and five different DNA regions were amplified, sequenced, and analyzed using plant DNA barcoding methods. Genetic analysis yielded 30 good quality sequences representing five taxa. Most specimens were identified as A. absinthium. Few studies focus on practical forensic applications of plant DNA barcoding methods using a case solved in a forensic laboratory with its difficulties and limitations. To the best of our knowledge, this is the first study to report an effective joint effort of forensic chemistry and botany techniques to assess plant material in Brazil. The availability of a new technical approach for the genetic sequencing of plant species will enhance many forensic investigations and inspire similar initiatives.

2018 ◽  
Vol 47 (1) ◽  
pp. 54-62 ◽  
Author(s):  
Lidia SKUZA ◽  
Izabela SZUĆKO ◽  
Ewa FILIP ◽  
Anastazja ADAMCZYK

DNA barcoding is a relatively new method of identifying plant species using short sequences of chloroplast DNA. Although there is a large number of studies using barcoding on various plant species, there are no such studies in the genus Secale. In this study the plant material consisted of 10 cultivated and non-cultivated species and subspecies of rye genus. Three chloroplast DNA regions (rbcL, matK, trnH-psbA) were tested for their suitability as DNA barcoding regions. Universal primers were used, and sequenced products were analyzed using Neighbor Joining and the Maximum Likelihood in the MEGA 7.1 program. We did not observe high variability in nucleotide sequences within the matK and rbcL regions. Only 2.2% of the sequences showed polymorphism in the rbcL region, while 6.5% in the matK region. The most variable trnH-psbA (15.6%) intergenic region was the most useful for rye barcoding. Individual application of the studied regions did not provide the expected results. None of the regions used in the study allowed the division of rye species and subspecies according to the adopted classification of the genus Secale. The results confirm that the use of matK and rbcL is insufficient for DNA barcoding in rye species, and better discrimination within the genus Secale can be obtained only in combination with the non-coding trnH-psbA sequence. Our results also indicate the necessity of using a different region. All of the new sequences have been deposited in Genbank.


2021 ◽  
Author(s):  
Valeriu Valeriu Iancu ◽  
Laura Adriana Bucur ◽  
Verginica Schröder ◽  
Manuela Rossemary Apetroaei

"The floral tips of the plant species Lythrum salicaria L. represent a rich source of total polyphenols, among which with the largest share we mention tannins, and this is why this plant material has a standardized monograph in the European Pharmacopoeia 10.0th edition. According to the literature accessed so far, the plant material has antioxidant, anti-inflammatory, hemostatic, antibacterial and antifungal properties, along with modulatory action on carbohydrate metabolism. Powder microscopic examination is an important step in establishing the identity of the plant species used, highlighting elements specific to the aerial part such as spiral vessels of the stem, fragments of the spongy mesophyll with calcium oxalate clusters cells and anomocytic stomata. The application of the SeDeM method on dried plant extracts represents an innovative trend in pharmaceutical technology and contributes to the collection of data in a structured and standardized form. In this paper, the functions and applications of the SeDeM expert system are illustrated upon the freeze-dried extract of Lythri herba for the purpose of easier identification and standardization. Future applications may include obtaining chewable gums or tablets by direct compression."


HortScience ◽  
2013 ◽  
Vol 48 (10) ◽  
pp. 1327-1333 ◽  
Author(s):  
Maria Papafotiou ◽  
Niki Pergialioti ◽  
Lamprini Tassoula ◽  
Ioannis Massas ◽  
Georgios Kargas

Green roofs could be a way to increase vegetation in the center of old Mediterranean cities. The need for conservation of local character and biodiversity requires the use of native plant species, whereas the deficiency of water, particularly in semiarid regions, requires the use of species with reduced irrigation needs. Moreover, the aged buildings lead to the use of lightweight green roof constructions. Therefore, research was undertaken to investigate the possibility of using three Mediterranean aromatic xerophytes, Artemisia absinthium L., Helichrysum italicum Roth., and H. orientale L., at an extensive green roof in Athens, Greece. Simultaneously, the possibility of using locally produced grape marc compost was investigated. Substrate type and depth and irrigation frequency effects on growth of these species were studied. Rooted cuttings were planted mid-May in plastic containers with a green roof infrastructure fitted (moisture retention and protection of the insulation mat, drainage layer, and filter sheet) and placed on a fully exposed third floor flat roof at the Agricultural University of Athens. Two types of substrates were used, grape marc compost:soil:perlite (2:3:5, v/v) and peat:soil:perlite (2:3:5, v/v, as a control), as well as two substrate depths, 7.5 (shallow) and 15 cm (deep), and two irrigation frequencies, sparse (5 or 7 days in shallow and deep substrate, respectively) and normal (3 or 5 days in shallow and deep substrate, respectively). Increased contents of macroelements, total phosphorus (P) and potassium (K) in particular, were recorded in the compost-amended substrate, whereas both substrates had similar physical properties. Plant growth was recorded from May to October. The deep compost-amended substrate, independent of irrigation frequency, resulted in taller plants with bigger diameter and aboveground dry weight in all species. However, a remarkable result was that shallow compost-amended substrate with sparse irrigation resulted in similar or even bigger plant growth of all plant species compared with deep peat-amended substrate with normal irrigation. Thus, all three species were found suitable for use in Mediterranean extensive or semi-intensive green roofs, whereas the use of grape marc compost in the substrate allowed for less water consumption and the reduction of substrate depth without restriction of plant growth at the establishment phase and the first period of drought.


2010 ◽  
Vol 30 (3) ◽  
pp. 679-688 ◽  
Author(s):  
A. El-Naggar ◽  
J. Rasmussen ◽  
A. Neergaard ◽  
A. El-Araby ◽  
H. Høgh-Jensen

Author(s):  
EunYoung Park ◽  
JiYeong Kim ◽  
HyeJin Lee

PLoS ONE ◽  
2017 ◽  
Vol 12 (4) ◽  
pp. e0175722 ◽  
Author(s):  
Abdolbaset Ghorbani ◽  
Yousef Saeedi ◽  
Hugo J. de Boer

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