scholarly journals An Out-of-Core GPU based Dimensionality Reduction Algorithm for Big Mass Spectrometry Data and Its Application in Bottom-up Proteomics

2017 ◽  
Author(s):  
Muaaz Gul Awan ◽  
Fahad Saeed
Keyword(s):  
Mass Spectrometry ◽  
Dimensionality Reduction ◽  
Mass Spectrometry Data ◽  
Reduction Algorithm ◽  
Bottom Up

scholarly journals Improved Protein Inference from Multiple Protease Bottom-Up Mass Spectrometry Data

2019 ◽  
Vol 18 (9) ◽  
pp. 3429-3438 ◽  
Author(s):  
Rachel M. Miller ◽  
Robert J. Millikin ◽  
Connor V. Hoffmann ◽  
Stefan K. Solntsev ◽  
Gloria M. Sheynkman ◽  
...  
Keyword(s):  
Mass Spectrometry ◽  
Mass Spectrometry Data ◽  
Bottom Up ◽  
Protein Inference

scholarly journals Ovarian cancer identification based on dimensionality reduction for high-throughput mass spectrometry data

2005 ◽  
Vol 21 (10) ◽  
pp. 2200-2209 ◽  
Author(s):  
J. S. Yu ◽  
S. Ongarello ◽  
R. Fiedler ◽  
X. W. Chen ◽  
G. Toffolo ◽  
...  
Keyword(s):  
Mass Spectrometry ◽  
Ovarian Cancer ◽  
Dimensionality Reduction ◽  
High Throughput ◽  
Mass Spectrometry Data

Bottom-up hydrogen deuterium exchange mass spectrometry: data analysis and interpretation

The Analyst ◽  
2017 ◽  
Vol 142 (16) ◽  
pp. 2874-2886 ◽  
Author(s):  
Kerene A. Brown ◽  
Derek J. Wilson
Keyword(s):  
Mass Spectrometry ◽  
Data Analysis ◽  
Deuterium Exchange ◽  
Mass Spectrometry Data ◽  
Hydrogen Deuterium Exchange ◽  
Bottom Up ◽  
Exchange Mass Spectrometry ◽  
Hydrogen Deuterium ◽  
Deuterium Exchange Mass Spectrometry ◽  
Hdx Ms

A tutorial review on the fundamentals of HDX-MS with an emphasis on data analysis and interpretation.

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