scholarly journals Lack of TEK Gene Mutation in Patients with Cutaneomucosal Venous Malformations from the North-Western Region of Algeria

2013 ◽  
Vol 2013 ◽  
pp. 1-7 ◽  
Author(s):  
Nabila Brahami ◽  
Mourad Aribi ◽  
Badr-Eddine Sari ◽  
Philippe Khau Van Kien ◽  
Isabelle Touitou ◽  
...  

Background. Venous malformations (VM) result from an error in vascular morphogenesis. The first gene suspected in their development is the TEK gene (tyrosine kinase, endothelial). Mutations of this gene have been identified in several Belgian families with a dominant form of the disease. Therefore, we investigated whether mutations in this TEK gene could explain the MV development in patients of families from Tlemcen region (north-western Algeria). Methods. Genomic DNA was extracted from leucocytes of ten patients. The search for mutations in all the 23 exons and in the 5′ and 3′ intronic sequences flanking the TEK gene was performed using PCR amplification and direct sequencing of amplified genomic DNA. Additionally, a search for somatic mutations of the gene TEK was performed on a biopsy of the venous malformation from one of the ten eligible patients. Results. The sequencing of the 23 exons of the TEK gene revealed neither germinal mutation in our ten patients nor somatic mutation in the tissue of the biopsy. Conclusion. The absence of mutation in the TEK gene in the population studied suggests that the TEK gene is not necessarily involved in the onset of VM; its association with these malformations may differ from one population to another.

Fossil Record ◽  
2010 ◽  
Vol 13 (1) ◽  
pp. 203-214 ◽  
Author(s):  
D. Korn ◽  
V. Ebbighausen ◽  
J. Bockwinkel

Four ammonoid species are described from the Early Carboniferous (Mississippian) Iridet Formation of the Ahnet and Mouydir (Central Sahara, Algeria); three of which are new: <i>Eurites temertassetensis</i> n. sp., <i>Trimorphoceras teguentourense</i> n. sp., and <i>Trimorphoceras azzelmattiense</i> n. sp. The species can be attributed to the North African <i>Ammonellipsites-Merocanites</i> Assemblage (<i>Fascipericyclus-Ammonellipsites</i> Genus Zone; Late Tournaisian to Early Viséan). Additionally, the two new species <i>Ammonellipsites sguilmensis</i> n. sp. and <i>Muensteroceras beniabbesense</i> n. sp. are described from the time equivalent Hassi Sguilma Formation of the Saoura Valley (north-western Algeria). <br><br> doi:<a href="http://dx.doi.org/10.1002/mmng.200900012" target="_blank">10.1002/mmng.200900012</a>


Blood ◽  
2006 ◽  
Vol 108 (11) ◽  
pp. 221-221 ◽  
Author(s):  
Patrick Brown ◽  
Emily McIntyre ◽  
Rachel Rau ◽  
Todd A. Alonzo ◽  
Robert Gerbing ◽  
...  

Abstract Nucleophosmin mutations (NPM-mu) result in aberrant cytoplasmic localization of the NPM protein and occur in 25–35% of adult AML. NPM-mu are most commonly found in cases with normal karyotype, and are frequently associated with FLT3/ITD mutations. NPM-mu have been associated with high remission induction rates and improved survival, especially in patients with normal karyotype that lack FLT3/ITD mutations. The incidence and clinical significance of NPM-mu in childhood AML are less well-characterized. The AIEOP in Italy reported NPM-mu in 7 of 107 (6.5%) children treated on its AML02 protocol, and a Taiwanese group reported NPM-mu in 1 of 47 (2.1%) of children. The prognostic significance of NPM-mu in childhood AML is not known. The purpose of this study was to determine the incidence and clinical significance of NPM-mu in two large cohorts of children with newly-diagnosed AML treated on U.S. cooperative group phase III clinical trials (CCG-2961 and POG-9421). Criteria for selection of study patients included enrollment on the therapeutic trial and availability of banked genomic DNA (for CCG-2961) or RNA (for POG-9421). 919 patients met these criteria (566 from CCG-2961, 353 from POG-9421). For the genomic DNA samples, exon 12 of the nucleophosmin gene was directly amplified by PCR. The RNA samples were reverse transcribed to cDNA prior to PCR amplification. Mutations were detected using SSCP gel electrophoresis and confirmed by direct sequencing. The incidence of NPM-mu was 8.8% (9.5% for CCG, 7.7% for POG). As in prior reports, all of the mutations consisted of 4-bp insertions that resulted in changes in the 2 trytophan residues at AA positions 288 and 290 (important for nuclear localization). Only 48% of the mutations were of the “A” type (compared to 70–80% in adult AML), and 36% were novel mutations. FLT3/ITD mutations were more common in NPM-mu than NPM-wild type (wt) patients (17% vs. 9%, p=0.0381). NPM-mu patients were older than NPM-wt (median age 12 vs. 9 years, p=0.018). NPM-mu was particularly uncommon in children less than 3 years (1 mutation in 178 patients). Females accounted for 62% of the NPM-mut patients vs. 46% of the NPM-wt patients (p=0.0154). 73% of NPM-mut patients had normal cytogenetics, vs. 25% of NPM-wt patients (p<0.0001). There were no significant differences between NPM-mut and NPM-wt patients in median WBC, platelet or hemoglobin counts, FAB classification, hepatosplenomegaly or CNS disease. As shown in the table, there were no significant differences in EFS or OS for either cohort, although there was a trend towards improved survival for NPM-mu patients on POG 9421, particularly within the normal karyotype subset. In conclusion, NPM mutations are less common in children than adults and appear to have less prognostic relevance, although prospective studies will be needed to determine whether NPM-mu may contribute to risk stratification in children with normal karyotype. CCG-2961 N EFS OS NPM-mu 45 36% 49% NPM-wt 407 41% 53% logrank p=0.762 p=0.909 POG-9421 N EFS OS NPM-mu 23 48% 52% NPM-wt 270 33% 49% logrank p=0.284 p=0.660 POG-9421 (nl karyotype) N EFS OS NPM-mu 16 56% 56% NPM-wt 69 28% 39% logrank p=0.065 p=0.150


2005 ◽  
Vol 51 (1) ◽  
pp. 35-39 ◽  
Author(s):  
Kathleen M Murphy ◽  
Karin D Berg ◽  
James R Eshleman

Abstract Background: Despite considerable advances, DNA sequencing has remained somewhat time-consuming and expensive, requiring three separate steps to generate sequencing products from a template: amplification of the target sequence; purification of the amplified product; and a sequencing reaction. Our aim was to develop a method to routinely combine PCR amplification and cycle sequencing into one single reaction, enabling direct sequencing of genomic DNA. Methods: Combined amplification and sequencing reactions were set up with Big Dye™ sequencing reagents (Applied Biosystems) supplemented with variable amounts of forward and reverse primers, deoxynucleotide triphosphates (dNTPs), and input DNA. Reactions were thermal-cycled for 35 or 45 cycles. Products were analyzed by capillary electrophoresis to detect sequencing products. Results: Reactions using two oligonucleotide primers at a ratio of 5:1 (500 nM primer 1 and 100 nM primer 2), 125 μM supplemental dNTPs, and 35–45 thermal cycles optimally supported combined amplification and cycle sequencing reactions. Our results suggest that these reactions are dominated by PCR during early cycles and convert to cycle sequencing in later cycles. We used this technique for a variety of sequencing applications, including the identification of germline mutations/polymorphisms in the Factor V and BRCA2 genes, sequencing of tumor DNA to identify somatic mutations in the DPC4/SMADH4 and FLT3 genes, and sequencing of 16S ribosomal DNA for bacterial speciation. Conclusions: PCR amplification and cycle sequencing can be combined into a single reaction using the conditions described. This technique allows direct sequencing of genomic DNA, decreasing the cost and labor involved in gene sequencing.


VASA ◽  
2017 ◽  
Vol 46 (6) ◽  
pp. 477-483
Author(s):  
Robert Karl Clemens ◽  
Frederic Baumann ◽  
Marc Husmann ◽  
Thomas Oleg Meier ◽  
Christoph Thalhammer ◽  
...  

Abstract. Background: Congenital venous malformations are frequently treated with sclerotherapy. Primary treatment goal is to control the often size-related symptoms. Functional impairment and aesthetical aspects as well as satisfaction have rarely been evaluated. Patients and methods: Medical records of patients who underwent sclerotherapy of spongiform venous malformations were reviewed and included in this retrospective study. The outcome of sclerotherapy as self-reported by patients was assessed in a 21 item questionnaire. Results: Questionnaires were sent to 166 patients with a total of 327 procedures. Seventy-seven patients (48 %) with a total of 159 procedures (50 %) responded to the survey. Fifty-seven percent of patients were male. The age ranged from 1 to 38.1 years with a median age of 16.4 years. The lower extremities were the most common treated area. Limitations caused by the venous malformation improved in the majority of patients (e.g. pain improvement 87 %, improvement of swelling 83 %) but also worsening of symptoms occurred in a minority of cases. Seventy-seven per cent would undergo sclerotherapy again. Conclusions: Sclerotherapy for treatment of venous malformations results in significant reduction of symptoms. Multiple treatments are often needed, but patients are willing to undergo them.


1996 ◽  
Vol 75 (05) ◽  
pp. 757-759 ◽  
Author(s):  
Rainer Blasczyk ◽  
Markus Ritter ◽  
Christian Thiede ◽  
Jenny Wehling ◽  
Günter Hintz ◽  
...  

SummaryResistance to activated protein C is the most common hereditary cause for thrombosis and significantly linked to factor V Leiden. In this study, primers were designed to identify the factor V mutation by allele-specific PCR amplification. 126 patients with thromboembolic events were analysed using this technique, PCR-RFLP and direct sequencing. The concordance between these techniques was 100%. In 27 patients a heterozygous factor VGln506 mutation was detected, whereas one patient with recurrent thromboembolism was homozygous for the point mutation. Due to its time- and cost-saving features allele-specific amplification should be considered for screening of factor VGln506.


2018 ◽  
Vol 40 (2) ◽  
pp. 63-85 ◽  
Author(s):  
L. Shumlyanskyy ◽  
L. Stepanyuk ◽  
S. Claesson ◽  
K. Rudenko ◽  
A. Bekker

2018 ◽  
Vol 20 (2) ◽  
pp. 121-134 ◽  
Author(s):  
G. G. Minicheva ◽  
V. N. Bolshakov ◽  
E. S. Kalashnik ◽  
A. B. Zotov ◽  
A. V. Marinets

Sign in / Sign up

Export Citation Format

Share Document