Molecular Epidemiology and Genetic History of Hepatitis C Virus Subtype 3a Infection in Thailand

Intervirology ◽  
2013 ◽  
Vol 56 (5) ◽  
pp. 284-294 ◽  
Author(s):  
Srunthron Akkarathamrongsin ◽  
Pitchaya Hacharoen ◽  
Pisit Tangkijvanich ◽  
Apiradee Theamboonlers ◽  
Yasuhito Tanaka ◽  
...  
2006 ◽  
Vol 78 (10) ◽  
pp. 1296-1303 ◽  
Author(s):  
Yoann Morice ◽  
Jean-François Cantaloube ◽  
Stéphanie Beaucourt ◽  
Laetitia Barbotte ◽  
Sija De Gendt ◽  
...  

2014 ◽  
Vol 27 ◽  
pp. 318-324 ◽  
Author(s):  
Irshad ur Rehman ◽  
Gilberto Vaughan ◽  
Michael A. Purdy ◽  
Guo-liang Xia ◽  
Joseph C. Forbi ◽  
...  

PLoS ONE ◽  
2012 ◽  
Vol 7 (8) ◽  
pp. e42002 ◽  
Author(s):  
Richard Njouom ◽  
Mélanie Caron ◽  
Guillaume Besson ◽  
Guy-Roger Ndong-Atome ◽  
Maria Makuwa ◽  
...  

2012 ◽  
Vol 2012 ◽  
pp. 1-10 ◽  
Author(s):  
Julieta Trinks ◽  
Adrián Gadano ◽  
Pablo Argibay

Hepatitis C virus (HCV) represents a major worldwide public health problem. The search for the key molecular biomarkers that may provide insight on the basis of the differences in disease progression, severity, and response to therapy is crucial for understanding the natural history of HCV, for estimating the burden of infection and for developing preventive interventions. Initially, molecular epidemiology studies have focused on studying the viral genetic diversity (genotypes, genetic variants, specific nucleotide and amino acid substitutions). However, the clinical heterogeneities of HCV infection and the imperfect predictability of the response to treatment have suggested the need to search for host genetic biomarkers. This led to the discovery of genetic polymorphisms playing a major role in the evolution of infection, as well as in treatment response and adverse effects, such as IL-28B, ITPA, and IP-10. As a consequence, nowadays the focus of molecular epidemiology studies has turned from the viral to the human genome. This paper will cover recent reports on the subject describing the most relevant viral as well as host genetic risk factors analyzed by past and current HCV molecular epidemiology studies.


PLoS ONE ◽  
2010 ◽  
Vol 5 (12) ◽  
pp. e14315 ◽  
Author(s):  
Maria Z. Sulbarán ◽  
Federico A. Di Lello ◽  
Yoneira Sulbarán ◽  
Clarisa Cosson ◽  
Carmen L. Loureiro ◽  
...  

Hematology ◽  
2001 ◽  
Vol 6 (2) ◽  
pp. 135-142 ◽  
Author(s):  
M. Franchini ◽  
A. Tagliaferri ◽  
G. Rossetti ◽  
F. Capra ◽  
E. De Maria ◽  
...  

2003 ◽  
Vol 49 (6) ◽  
pp. 384-385 ◽  
Author(s):  
Azza El‐Sherbini ◽  
Wafaa Hassan ◽  
Mohamad Abdel‐Hamid ◽  
Ahmad Naeim

2009 ◽  
Vol 6 (1) ◽  
pp. 110 ◽  
Author(s):  
Obinna O Nwankiti ◽  
James A Ndako ◽  
Georgebest ON Echeonwu ◽  
Atanda O Olabode ◽  
Chika I Nwosuh ◽  
...  

2019 ◽  
Vol 24 (9) ◽  
Author(s):  
Ana Belen Pérez ◽  
Bram Vrancken ◽  
Natalia Chueca ◽  
Antonio Aguilera ◽  
Gabriel Reina ◽  
...  

Background Reducing the burden of the hepatitis C virus (HCV) requires large-scale deployment of intervention programmes, which can be informed by the dynamic pattern of HCV spread. In Spain, ongoing transmission of HCV is mostly fuelled by people who inject drugs (PWID) infected with subtype 1a (HCV1a). Aim Our aim was to map how infections spread within and between populations, which could help formulate more effective intervention programmes to halt the HCV1a epidemic in Spain. Methods Epidemiological links between HCV1a viruses from a convenience sample of 283 patients in Spain, mostly PWID, collected between 2014 and 2016, and 1,317, 1,291 and 1,009 samples collected abroad between 1989 and 2016 were reconstructed using sequences covering the NS3, NS5A and NS5B genes. To efficiently do so, fast maximum likelihood-based tree estimation was coupled to a flexible Bayesian discrete phylogeographic inference method. Results The transmission network structure of the Spanish HCV1a epidemic was shaped by continuous seeding of HCV1a into Spain, almost exclusively from North America and European countries. The latter became increasingly relevant and have dominated in recent times. Export from Spain to other countries in Europe was also strongly supported, although Spain was a net sink for European HCV1a lineages. Spatial reconstructions showed that the epidemic in Spain is diffuse, without large, dominant within-country networks. Conclusion To boost the effectiveness of local intervention efforts, concerted supra-national strategies to control HCV1a transmission are needed, with a strong focus on the most important drivers of ongoing transmission, i.e. PWID and other high-risk populations.


Author(s):  
Takeshi Hatanaka ◽  
Satoru Kakizaki ◽  
Takuya Kaburagi ◽  
Naoto Saito ◽  
Sachi Nakano ◽  
...  

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