Probing Amyloid β and the Antibody Interaction Using Atomic Force Microscopy

2018 ◽  
Vol 18 (2) ◽  
pp. 1410-1413 ◽  
Author(s):  
Sung-Woong Han ◽  
Tae-Hoon Lee ◽  
Min-Sik Kang ◽  
Hyung Jin Kim ◽  
Hoon-Kyu Shin
ACS Nano ◽  
2017 ◽  
Vol 11 (12) ◽  
pp. 12202-12209 ◽  
Author(s):  
Siddhartha Banerjee ◽  
Zhiqiang Sun ◽  
Eric Y. Hayden ◽  
David B. Teplow ◽  
Yuri L. Lyubchenko

2020 ◽  
Vol 21 (12) ◽  
pp. 4287
Author(s):  
Takahiro Watanabe-Nakayama ◽  
Bikash R. Sahoo ◽  
Ayyalusamy Ramamoorthy ◽  
Kenjiro Ono

Individual Alzheimer’s disease (AD) patients have been shown to have structurally distinct amyloid-β (Aβ) aggregates, including fibrils, in their brain. These findings suggest the possibility of a relationship between AD progression and Aβ fibril structures. Thus, the characterization of the structural dynamics of Aβ could aid the development of novel therapeutic strategies and diagnosis. Protein structure and dynamics have typically been studied separately. Most of the commonly used biophysical approaches are limited in providing substantial details regarding the combination of both structure and dynamics. On the other hand, high-speed atomic force microscopy (HS-AFM), which simultaneously visualizes an individual protein structure and its dynamics in liquid in real time, can uniquely link the structure and the kinetic details, and it can also unveil novel insights. Although amyloidogenic proteins generate heterogeneously aggregated species, including transient unstable states during the aggregation process, HS-AFM elucidated the structural dynamics of individual aggregates in real time in liquid without purification and isolation. Here, we review and discuss the HS-AFM imaging of amyloid aggregation and strategies to optimize the experiments showing findings from Aβ and amylin, which is associated with type II diabetes, shares some common biological features with Aβ, and is reported to be involved in AD.


1996 ◽  
Vol 15 (2) ◽  
pp. 193-203 ◽  
Author(s):  
W. B. Stine ◽  
S. W. Snyder ◽  
U. S. Ladror ◽  
W. S. Wade ◽  
M. F. Miller ◽  
...  

2022 ◽  
Vol 23 (2) ◽  
pp. 889
Author(s):  
Atsuya Matsui ◽  
Jean-Pierre Bellier ◽  
Takeshi Kanai ◽  
Hiroki Satooka ◽  
Akio Nakanishi ◽  
...  

The most common type of dementia, Alzheimer’s disease, is associated with senile plaques formed by the filamentous aggregation of hydrophobic amyloid-β (Aβ) in the brains of patients. Small oligomeric assemblies also occur and drugs and chemical compounds that can interact with such assemblies have attracted much attention. However, these compounds need to be solubilized in appropriate solvents, such as ethanol, which may also destabilize their protein structures. As the impact of ethanol on oligomeric Aβ assembly is unknown, we investigated the effect of various concentrations of ethanol (0 to 7.2 M) on Aβ pentameric assemblies (Aβp) by combining blue native-PAGE (BN-PAGE) and ambient air atomic force microscopy (AFM). This approach was proven to be very convenient and reliable for the quantitative analysis of Aβ assembly. The Gaussian analysis of the height histogram obtained from the AFM images was correlated with band intensity on BN-PAGE for the quantitative estimation of Aβp. Our observations indicated up to 1.4 M (8.3%) of added ethanol can be used as a solvent/vehicle without quantitatively affecting Aβ pentamer stability. Higher concentration induced significant destabilization of Aβp and eventually resulted in the complete disassembly of Aβp.


2011 ◽  
Vol 26 (3) ◽  
pp. 485-494 ◽  
Author(s):  
Francis Hane ◽  
Elizabeth Drolle ◽  
Ravi Gaikwad ◽  
Erin Faught ◽  
Zoya Leonenko

2019 ◽  
Vol 123 (49) ◽  
pp. 10376-10383 ◽  
Author(s):  
Yi-Chih Lin ◽  
Hiroaki Komatsu ◽  
Jianqiang Ma ◽  
Paul H. Axelsen ◽  
Zahra Fakhraai

2016 ◽  
Vol 113 (21) ◽  
pp. 5835-5840 ◽  
Author(s):  
Takahiro Watanabe-Nakayama ◽  
Kenjiro Ono ◽  
Masahiro Itami ◽  
Ryoichi Takahashi ◽  
David B. Teplow ◽  
...  

Aggregation of amyloidogenic proteins into insoluble amyloid fibrils is implicated in various neurodegenerative diseases. This process involves protein assembly into oligomeric intermediates and fibrils with highly polymorphic molecular structures. These structural differences may be responsible for different disease presentations. For this reason, elucidation of the structural features and assembly kinetics of amyloidogenic proteins has been an area of intense study. We report here the results of high-speed atomic force microscopy (HS-AFM) studies of fibril formation and elongation by the 42-residue form of the amyloid β-protein (Aβ1–42), a key pathogenetic agent of Alzheimer's disease. Our data demonstrate two different growth modes of Aβ1–42, one producing straight fibrils and the other producing spiral fibrils. Each mode depends on initial fibril nucleus structure, but switching from one growth mode to another was occasionally observed, suggesting that fibril end structure fluctuated between the two growth modes. This switching phenomenon was affected by buffer salt composition. Our findings indicate that polymorphism in fibril structure can occur after fibril nucleation and is affected by relatively modest changes in environmental conditions.


2013 ◽  
Vol 4 (4) ◽  
pp. 535-539 ◽  
Author(s):  
Yanli Zhou ◽  
Jing Wang ◽  
Lantao Liu ◽  
Rongrong Wang ◽  
Xinhe Lai ◽  
...  

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