scholarly journals Allelic sequence heterozygosity in single Giardia parasites

2012 ◽  
Vol 12 (1) ◽  
pp. 65 ◽  
Author(s):  
Johan Ankarklev ◽  
Staffan G Svärd ◽  
Marianne Lebbad
Keyword(s):  
2005 ◽  
Vol 73 (9) ◽  
pp. 5928-5935 ◽  
Author(s):  
Kevin K. A. Tetteh ◽  
David R. Cavanagh ◽  
Patrick Corran ◽  
Rosemary Musonda ◽  
Jana S. McBride ◽  
...  

ABSTRACT Polymorphism in pathogen antigens presents a complex challenge for vaccine design. A prime example is the N-terminal block 2 region of the Plasmodium falciparum merozoite surface protein 1 (MSP1), to which allele-specific antibodies have been associated with protection from malaria. In a Zambian population studied here, 49 of 91 alleles sampled were of the K1-like type (the most common of three block 2 types in all African populations), and most of these had unique sequences due to variation in tri- and hexapeptide repetitive motifs. There were significant negative correlations between allelic sequence lengths of different regions of the repeats, so the complete repeat sequence had less length variation than its component parts, suggesting a constraint on overall length. Diverse epitopes recognized by three murine monoclonal antibodies and 24 individual human sera were then mapped by using a comprehensive panel of synthetic peptides, revealing epitopes in all regions of the repeats. To incorporate these different epitopes in a single molecule, a composite sequence of minimal overall length (78 amino acids) was then designed and expressed as a recombinant antigen. More human immune sera reacted with this “K1-like Super Repeat” antigen than with proteins consisting of single natural allelic sequences, and immunization of mice elicited antibodies that recognized a range of five cultured parasite lines with diverse K1-like MSP1 block 2 repeat sequences. Thus, complex allelic polymorphism was deconstructed and a minimal composite polyvalent antigen was engineered, delivering a designed candidate sequence for inclusion in a malaria vaccine.


Gene ◽  
1999 ◽  
Vol 236 (1) ◽  
pp. 43-51 ◽  
Author(s):  
Yoshitsugu Miyazaki ◽  
Antonia Geber ◽  
Haruko Miyazaki ◽  
Derek Falconer ◽  
Tanya Parkinson ◽  
...  

2002 ◽  
Vol 70 (4) ◽  
pp. 269-277 ◽  
Author(s):  
Ritushree Kukreti ◽  
Debasis Dash ◽  
Vineetha K E ◽  
Sanchita Chakravarty ◽  
Swapan Kr Das ◽  
...  

2014 ◽  
Vol 5 ◽  
Author(s):  
Arwa Shahin ◽  
Marinus J. M. Smulders ◽  
Jaap M. van Tuyl ◽  
Paul Arens ◽  
Freek T. Bakker

1986 ◽  
Vol 6 (11) ◽  
pp. 3685-3693 ◽  
Author(s):  
B Y Ahn ◽  
D M Livingston

Plasmids capable of undergoing genetic exchange in mitotically dividing Saccharomyces cerevisiae cells were used to measure the length of gene conversion events, to determine patterns of coconversion when multiple markers were present, and to correlate the incidence of reciprocal recombination with the length of conversion tracts. To construct such plasmids, restriction site linkers were inserted both within the HIS3 gene and in the flanking sequences, and two different his3- alleles were placed in a vector. Characterization of the genetic exchanges in these plasmids showed that most occur with the conversion of one his3- allele. Many of these events included coconversions in which more than one marker along the allelic sequence was replaced. The frequency of coconversion decreased with the distance between two markers such that markers further than 1 kilobase apart were infrequently coconverted. From these results the average length of conversion was determined to be approximately 0.5 kilobase. Examination of coconversions involving three or more markers revealed an almost obligatory, simultaneous coconversion pattern of all markers. Thus, when two markers which flank an intervening marker are converted, the intervening marker is 20 times more likely to be converted than to remain unchanged. The results of these studies also showed that the incidence of reciprocal recombination, which accompanies more than 20% of the conversion events, is more frequent when the conversion tract is longer than average.


1995 ◽  
Vol 46 (4) ◽  
pp. 330-332 ◽  
Author(s):  
E. J. Adams ◽  
I. Scott ◽  
A. Shah ◽  
K. L. Arnett ◽  
S. G. E. Marsh ◽  
...  
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