scholarly journals Novel Disulfide Bond-Mediated Dimerization of the CARD Domain Was Revealed by the Crystal Structure of CARMA1 CARD

PLoS ONE ◽  
2013 ◽  
Vol 8 (11) ◽  
pp. e79778 ◽  
Author(s):  
Tae-ho Jang ◽  
Jin Hee Park ◽  
Hyun Ho Park
2001 ◽  
Vol 43 (4) ◽  
pp. 413-419 ◽  
Author(s):  
Koji Inaka ◽  
Eiko Kanaya ◽  
Masakazu Kikuchi ◽  
Kunio Miki

FEBS Letters ◽  
2015 ◽  
Vol 589 (11) ◽  
pp. 1200-1206 ◽  
Author(s):  
Masahiro Watanabe ◽  
Harumi Fukada ◽  
Hiroyuki Inoue ◽  
Kazuhiko Ishikawa

eLife ◽  
2020 ◽  
Vol 9 ◽  
Author(s):  
Andrew I Flyak ◽  
Stormy E Ruiz ◽  
Jordan Salas ◽  
Semi Rho ◽  
Justin R Bailey ◽  
...  

A vaccine protective against diverse HCV variants is needed to control the HCV epidemic. Structures of E2 complexes with front layer-specific broadly neutralizing antibodies (bNAbs) isolated from HCV-infected individuals, revealed a disulfide bond-containing CDRH3 that adopts straight (individuals who clear infection) or bent (individuals with chronic infection) conformation. To investigate whether a straight versus bent disulfide bond-containing CDRH3 is specific to particular HCV-infected individuals, we solved a crystal structure of the HCV E2 ectodomain in complex with AR3X, a bNAb with an unusually long CDRH2 that was isolated from the chronically-infected individual from whom the bent CDRH3 bNAbs were derived. The structure revealed that AR3X utilizes both its ultralong CDRH2 and a disulfide motif-containing straight CDRH3 to recognize the E2 front layer. These results demonstrate that both the straight and bent CDRH3 classes of HCV bNAb can be elicited in a single individual, revealing a structural plasticity of VH1-69-derived bNAbs.


2020 ◽  
Author(s):  
Charles R Midgett ◽  
Rachel A Swindell ◽  
Maria Pellegrini ◽  
F Jon Kull

AbstractToxR is a transmembrane transcription factor that, together with its integral membrane periplasmic binding partner ToxS, is conserved across the Vibrio family. In some pathogenic Vibrios, including V. parahaemolyticus and V. cholerae, ToxR is required for bile resistance and virulence, and ToxR is fully activated and protected from degradation by ToxS. ToxS achieves this in part by ensuring formation of an intra-chain disulfide bond in the C-terminal periplasmic domain of ToxR (dbToxRp). In this study, biochemical analysis showed dbToxRp to have a higher affinity for the ToxS periplasmic domain than the non-disulfide bonded conformation. Analysis of our dbToxRp crystal structure showed this is due to disulfide bond stabilization. Furthermore, dbToxRp is structurally homologous to the V. parahaemolyticus VtrA periplasmic domain. These results highlight the critical structural role of disulfide bond in ToxR and along with VtrA define a domain fold involved in environmental sensing conserved across the Vibrio family.


Author(s):  
Sarah Sainsbury ◽  
Jingshan Ren ◽  
Nigel J. Saunders ◽  
David I. Stuart ◽  
Raymond J. Owens

The crystal structure of the regulatory domain of NMB2055, a putative MetR regulator fromNeisseria meningitidis, is reported at 2.5 Å resolution. The structure revealed that there is a disulfide bond inside the predicted effector-binding pocket of the regulatory domain. Mutation of the cysteines (Cys103 and Cys106) that form the disulfide bond to serines resulted in significant changes to the structure of the effector pocket. Taken together with the high degree of conservation of these cysteine residues within MetR-related transcription factors, it is suggested that the Cys103 and Cys106 residues play an important role in the function of MetR regulators.


1989 ◽  
Vol 42 (8) ◽  
pp. 1403 ◽  
Author(s):  
TCW Mak ◽  
WH Yip ◽  
WH Chan ◽  
G Smith ◽  
CHL Kennard

The crystal structure of bis(2-chlorophenyl) disulfide has been determined and refined to a residual of 0.035 for 1573 observed reflections. Crystals are monoclinic, space group P21/a with Z 4 in a cell of dimensions a 7.724(1), b 22.360(7), c 7.917(2) � , β 114. 75�. The two chlorophenyl rings are synclinally related with a torsion angle of -85.0 � down the disulfide bond vector.


IUCrJ ◽  
2018 ◽  
Vol 5 (1) ◽  
pp. 82-92 ◽  
Author(s):  
Jinsook Ahn ◽  
Kyung Ku Jang ◽  
Inseong Jo ◽  
Hasan Nurhasni ◽  
Jong Gyu Lim ◽  
...  

Peroxiredoxins (Prxs) are ubiquitous cysteine-based peroxidase enzymes. Recently, a new type of Prx, VvPrx3, was identified in the pathogenic bacterium Vibrio vulnificus as being important for survival in macrophages. It employs only one catalytic cysteine residue to decompose peroxides. Here, crystal structures of VvPrx3 representing its reduced and oxidized states have been determined, together with an H2O2-bound structure, at high resolution. The crystal structure representing the reduced Prx3 showed a typical dimeric interface, called the A-type interface. However, VvPrx3 forms an oligomeric interface mediated by a disulfide bond between two catalytic cysteine residues from two adjacent dimers, which differs from the doughnut-like oligomers that appear in most Prxs. Subsequent biochemical studies showed that this disulfide bond was induced by treatment with nitric oxide (NO) as well as with peroxides. Consistently, NO treatment induced expression of the prx3 gene in V. vulnificus, and VvPrx3 was crucial for the survival of bacteria in the presence of NO. Taken together, the function and mechanism of VvPrx3 in scavenging peroxides and NO stress via oligomerization are proposed. These findings contribute to the understanding of the diverse functions of Prxs during pathogenic processes at the molecular level.


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