scholarly journals Somatic instability of the expanded GAA repeats in Friedreich’s ataxia

PLoS ONE ◽  
2017 ◽  
Vol 12 (12) ◽  
pp. e0189990 ◽  
Author(s):  
Ashlee Long ◽  
Jill S. Napierala ◽  
Urszula Polak ◽  
Lauren Hauser ◽  
Arnulf H. Koeppen ◽  
...  
Author(s):  
Iang-Shan Suen ◽  
Jamie N. Rhodes ◽  
Mellisa Christy ◽  
Brian McEwen ◽  
Donald M. Gray ◽  
...  

2012 ◽  
Vol 40 (9) ◽  
pp. 3964-3974 ◽  
Author(s):  
Gurangad S. Chandok ◽  
Mayank P. Patel ◽  
Sergei M. Mirkin ◽  
Maria M. Krasilnikova

2019 ◽  
Vol 47 (20) ◽  
pp. 10728-10743 ◽  
Author(s):  
Carlotta Bon ◽  
Riccardo Luffarelli ◽  
Roberta Russo ◽  
Silvia Fortuni ◽  
Bianca Pierattini ◽  
...  

Abstract Friedreich's ataxia (FRDA) is an untreatable disorder with neuro- and cardio-degenerative progression. This monogenic disease is caused by the hyper-expansion of naturally occurring GAA repeats in the first intron of the FXN gene, encoding for frataxin, a protein implicated in the biogenesis of iron-sulfur clusters. As the genetic defect interferes with FXN transcription, FRDA patients express a normal frataxin protein but at insufficient levels. Thus, current therapeutic strategies are mostly aimed to restore physiological FXN expression. We have previously described SINEUPs, natural and synthetic antisense long non-coding RNAs, which promote translation of partially overlapping mRNAs through the activity of an embedded SINEB2 domain. Here, by in vitro screening, we have identified a number of SINEUPs targeting human FXN mRNA and capable to up-regulate frataxin protein to physiological amounts acting at the post-transcriptional level. Furthermore, FXN-specific SINEUPs promote the recovery of disease-associated mitochondrial aconitase defects in FRDA-derived cells. In summary, we provide evidence that SINEUPs may be the first gene-specific therapeutic approach to activate FXN translation in FRDA and, more broadly, a novel scalable platform to develop new RNA-based therapies for haploinsufficient diseases.


2008 ◽  
Vol 11 (1) ◽  
pp. 61-64 ◽  
Author(s):  
S Kocheva ◽  
S Trivodalieva ◽  
S Vlaski-Jekic ◽  
M Kuturec ◽  
G Efremov

Molecular Analysis of Friedreich's Ataxia in Macedonian PatientsFriedreich's ataxia (FRDA) is rare a progressive neurodegenerative disorder of autosomal recessive inheritance, which is associated with an unstable expansion of a GAA trinucleotide repeat in the first intron of the frataxin gene on chromosome 9q13. We have performed molecular analyses of the frataxin gene of 40 patients with spinocerebellar ataxia from the Republic of Macedonia. Fifteen had early onset of progressive ataxia (before the age of 25), while the remainder were over 25 years old at the time of diagnosis. Only 14 patients had a mutation in the frataxin gene and all of these had early onset ataxia. The number of GAA repeats was in the normal range in 50 healthy individuals.


Cell Reports ◽  
2016 ◽  
Vol 16 (5) ◽  
pp. 1218-1227 ◽  
Author(s):  
Jeannine Gerhardt ◽  
Angela D. Bhalla ◽  
Jill Sergesketter Butler ◽  
James W. Puckett ◽  
Peter B. Dervan ◽  
...  

FEBS Letters ◽  
2006 ◽  
Vol 580 (22) ◽  
pp. 5399-5405 ◽  
Author(s):  
LaKechia Grant ◽  
Jun Sun ◽  
Hongzhi Xu ◽  
S.H. Subramony ◽  
Jonathan B. Chaires ◽  
...  

2021 ◽  
Vol 118 (5) ◽  
pp. e2013080118
Author(s):  
Alexander J. Neil ◽  
Julia A. Hisey ◽  
Ishtiaque Quasem ◽  
Ryan J. McGinty ◽  
Marcin Hitczenko ◽  
...  

Nearly 50 hereditary diseases result from the inheritance of abnormally long repetitive DNA microsatellites. While it was originally believed that the size of inherited repeats is the key factor in disease development, it has become clear that somatic instability of these repeats throughout an individual’s lifetime strongly contributes to disease onset and progression. Importantly, somatic instability is commonly observed in terminally differentiated, postmitotic cells, such as neurons. To unravel the mechanisms of repeat instability in nondividing cells, we created an experimental system to analyze the mutability of Friedreich’s ataxia (GAA)n repeats during chronological aging of quiescent Saccharomyces cerevisiae. Unexpectedly, we found that the predominant repeat-mediated mutation in nondividing cells is large-scale deletions encompassing parts, or the entirety, of the repeat and adjacent regions. These deletions are caused by breakage at the repeat mediated by mismatch repair (MMR) complexes MutSβ and MutLα and DNA endonuclease Rad1, followed by end-resection by Exo1 and repair of the resulting double-strand breaks (DSBs) via nonhomologous end joining. We also observed repeat-mediated gene conversions as a result of DSB repair via ectopic homologous recombination during chronological aging. Repeat expansions accrue during chronological aging as well—particularly in the absence of MMR-induced DSBs. These expansions depend on the processivity of DNA polymerase δ while being counteracted by Exo1 and MutSβ, implicating nick repair. Altogether, these findings show that the mechanisms and types of (GAA)n repeat instability differ dramatically between dividing and nondividing cells, suggesting that distinct repeat-mediated mutations in terminally differentiated somatic cells might influence Friedreich’s ataxia pathogenesis.


2019 ◽  
Vol 40 ◽  
pp. 101529 ◽  
Author(s):  
Jixue Li ◽  
Natalia Rozwadowska ◽  
Amanda Clark ◽  
Daniel Fil ◽  
Jill S. Napierala ◽  
...  

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