scholarly journals neuTube 1.0: A New Design for Efficient Neuron Reconstruction Software Based on the SWC Format

eNeuro ◽  
2015 ◽  
Vol 2 (1) ◽  
pp. ENEURO.0049-14.2014 ◽  
Author(s):  
Linqing Feng ◽  
Ting Zhao ◽  
Jinhyun Kim
2015 ◽  
Vol 75 (2) ◽  
Author(s):  
Ho Wei Yong ◽  
Abdullah Bade ◽  
Rajesh Kumar Muniandy

Over the past thirty years, a number of researchers have investigated on 3D organ reconstruction from medical images and there are a few 3D reconstruction software available on the market. However, not many researcheshave focused on3D reconstruction of breast cancer’s tumours. Due to the method complexity, most 3D breast cancer’s tumours reconstruction were done based on MRI slices dataeven though mammogram is the current clinical practice for breast cancer screening. Therefore, this research will investigate the process of creating a method that will be able to reconstruct 3D breast cancer’s tumours from mammograms effectively.  Several steps were proposed for this research which includes data acquisition, volume reconstruction, andvolume rendering. The expected output from this research is the 3D breast cancer’s tumours model that is generated from correctly registered mammograms. The main purpose of this research is to come up with a 3D reconstruction method that can produce good breast cancer model from mammograms while using minimal computational cost.


2012 ◽  
Author(s):  
Daniele Trocino ◽  
CMS Collaboration

2003 ◽  
Vol 2003 (2) ◽  
pp. 1-4
Author(s):  
Cecile Duboz ◽  
Siew Ching Tan ◽  
Steve Quenette ◽  
Gordon S. Lister ◽  
Bill Appelbe

2020 ◽  
Vol 245 ◽  
pp. 01031
Author(s):  
Thiago Rafael Fernandez Perez Tomei

The CMS experiment has been designed with a two-level trigger system: the Level-1 Trigger, implemented on custom-designed electronics, and the High Level Trigger, a streamlined version of the CMS offline reconstruction software running on a computer farm. During its second phase the LHC will reach a luminosity of 7.5 1034 cm−2 s−1 with a pileup of 200 collisions, producing integrated luminosity greater than 3000 fb−1 over the full experimental run. To fully exploit the higher luminosity, the CMS experiment will introduce a more advanced Level-1 Trigger and increase the full readout rate from 100 kHz to 750 kHz. CMS is designing an efficient data-processing hardware trigger that will include tracking information and high-granularity calorimeter information. The current Level-1 conceptual design is expected to take full advantage of advances in FPGA and link technologies over the coming years, providing a high-performance, low-latency system for large throughput and sophisticated data correlation across diverse sources. The higher luminosity, event complexity and input rate present an unprecedented challenge to the High Level Trigger that aims to achieve a similar efficiency and rejection factor as today despite the higher pileup and more pure preselection. In this presentation we will discuss the ongoing studies and prospects for the online reconstruction and selection algorithms for the high-luminosity era.


Author(s):  
K. Nakano ◽  
Y. Tanaka ◽  
H. Suzuki ◽  
K. Hayakawa ◽  
M. Kurodai

Abstract. Unmanned aerial vehicles (UAVs) equipped with image sensors, which have been widely used in various fields such as construction, agriculture, and disaster management, can obtain images at the millimeter to decimeter scale. Useful tools that produce realistic surface models using 3D reconstruction software based on computer vision technologies are generally used to produce datasets from acquired images using UAVs. However, it is difficult to obtain the feature points from surfaces with limited texture, such as new asphalt or concrete, or detect the ground in areas such as forests, which are commonly concealed by vegetation. A promising method to address such issues is the use of UAV-equipped laser scanners. Recently, low and high performance products that use direct georeferencing devices integrated with laser scanners have been available. Moreover, there have been numerous reports regarding the various applications of UAVs equipped with laser scanners; however, these reports only discuss UAVs as measuring devices. Therefore, to understand the functioning of UAVs equipped with laser scanners, we investigated the theoretical accuracy of the survey grade laser scanner unit from the viewpoint of photogrammetry. We evaluated the performance of the VUX-1HA laser scanner equipped on a Skymatix X-LS1 UAV at a construction site. We presented the theoretical values obtained using the observation equations and results of the accuracy aspects of the acquired data in terms of height.


2021 ◽  
Author(s):  
Manuel Chevalier

Abstract. Statistical climate reconstruction techniques are practical tools to study past climate variability from fossil proxy data. In particular, the methods based on probability density functions (PDFs) are powerful at producing robust results from various environments and proxies. However, accessing and curating the necessary calibration data, as well as the complexity of interpreting probabilistic results, often limit their use in palaeoclimatological studies. To address these problems, I present a new R package (crestr) to apply the CREST method (Climate REconstruction SofTware) on diverse palaeoecological datasets. crestr includes a globally curated calibration dataset for six common climate proxies (i.e. plants, beetles, chironomids, rodents, foraminifera, and dinoflagellate cysts) that enables its use in most terrestrial and marine regions. The package can also be used with private data collections instead of, or in combination with, the provided dataset. It also includes a suite of graphical diagnostic tools to represent the data at each step of the reconstruction process and provide insights into the effect of the different modelling assumptions and external factors that underlie a reconstruction. With this R package, the CREST method can now be used in a scriptable environment, thus simplifying its use and integration in existing workflows. It is hoped that crestr will contribute to producing the much-needed quantified records from the many regions where climate reconstructions are currently lacking, despite the existence of suitable fossil records.


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