scholarly journals Geastrum chamelense (Geastraceae, Agaricomycetes), a new species with setose endoperidium from the tropical dry forest in Jalisco, Mexico

2021 ◽  
Author(s):  
Silvia Bautista-Hernández ◽  
Tania Raymundo ◽  
Elvira Aguirre-Acosta ◽  
César Ramiro Martínez-González Martínez-González ◽  
Ricardo Valenzuela
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Tropical Dry Forest ◽  
Molecular Data ◽  
Dry Forest ◽  
Type Material ◽  
Biological Station ◽  
Phylogenetic Perspective ◽  
A New Species

Background and Aims: Geastrum is characterized by stelliform basidiomata, exoperidium with three layers, sessile or stalked endoperidium, and sulcate, plicate, folded or fibrillose peristome, distinctly or indistinctly delimited, sometimes with mycosclereids. The objective of this study is to describe and illustrate Geastrum chamelense with morphological, ecological and molecular data as a new species from the Chamela Biological Station, Jalisco, Mexico. Methods: Basidiomata collections with different degrees of maturity gathered in 2010 and 2011 from tropical dry forest at the Chamela Biological Station in Jalisco state are described macro- and microscopically. The type material is deposited in the fungal collections of the herbaria ENCB and MEXU. The extraction of DNA, as well as the phylogenetic analyses of ITS, LSU, atp6 and rpb1 sequences, are based on the holotype. Key results: Geastrum chamelense is distinguished by its greyish brown basidiomata, pseudofornicate, fleshy exoperidium, not hygroscopic, sessile endoperidium, subglobose to depressed with peristome plicate, not delimited, and setae present. The latter character is shared with Geastrum setiferum from Brazil, but that species has shorter and wider setae (95-215 × 20-47 µm) than G. chamelense (102-330 × 10.2-15.3 µm). From a phylogenetic perspective, G. chamelense is sister to G. hieronymi and G. cf. calceum, while G. setiferum is not related, as it appears in a separate clade. Conclusions: Geastrum chamelense is recognized as a new species based on morphological, ecological and molecular data.

scholarly journals Morphological and molecular identification of a new species of Atraporiella (Polyporales, Basidiomycota) in China

Phytotaxa ◽  
2017 ◽  
Vol 332 (1) ◽  
pp. 31 ◽  
Author(s):  
ZI-QIANG WU ◽  
SHAN SHEN ◽  
KAI-YUE LUO ◽  
ZHENG-HUI WANG ◽  
CHANG-LIN ZHAO
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Large Subunit ◽  
Strong Support ◽  
Molecular Data ◽  
Fungal Species ◽  
Monophyletic Lineage ◽  
Inference Methods ◽  
A New Species ◽  
Molecular Characters

A new poroid wood-inhabiting fungal species, Atraporiella yunnanensis sp. nov., is proposed based on morphological and molecular characters. The species is characterized by cream pore surface when dry, which is easy to separate from substrate and very rapidly stained dark brown to black when bruised; hyphal system monomitic with generative hyphae hyaline to pale brown, thin-walled, unbranched, interwoven; slightly allantoid basidiospores, 2.2–3 × 0.8–1.5 µm. The internal transcribed spacer (ITS) and the large subunit (LSU) regions of nuclear ribosomal RNA gene sequences of the studied samples were generated, and phylogenetic analyses were performed with maximum likelihood, maximum parsimony and bayesian inference methods. The phylogenetic analysis based on molecular data of ITS+nLSU sequences showed that Atraporiella yunnanensis belonged to the residual polyporoid clade, formed a monophyletic lineage with a strong support (100% BS, 100% BP, 1.00 BPP) and was closely related to A. neotropica, and then grouped with other related genera: Antrodiella, Pouzaroporia, Steccherinum and Xanthoporus. Both morphological and molecular characters confirmed the placement of the new species in Atraporiella.

Lecanicillium subprimulinum (Cordycipitaceae, Hypocreales), a novel species from Baoshan, Yunnan

Phytotaxa ◽  
2018 ◽  
Vol 348 (2) ◽  
pp. 99 ◽  
Author(s):  
SHIKE HUANG ◽  
SAJEEWA S.N. MAHARACHCHIKUMBURA ◽  
RAJESH JEEWON ◽  
D JAYARAMA BHAT ◽  
RUNGTIWA PHOOKAMSAK ◽  
...  
Keyword(s):  
New Species ◽  
Novel Species ◽  
Phylogenetic Analyses ◽  
Molecular Data ◽  
Its Sequence ◽  
New Taxon ◽  
Sexual Morph ◽  
The Family ◽  
Asexual Morphs ◽  
A New Species

In this paper, we report a new asexual-morph taxon belonging to the family Cordycipitaceae (Hypocreales), which is associated with a sexual morph of an ophioceras-like taxon on submerged wood collected from Baoshan, Yunnan, China. Morphologically, this new taxon is similar to known asexual morphs of Lecanicillium and characterized by conidiophores arising from hyaline hyphae, with gregarious, ellipsoid to ovoid, aseptate conidia. Phylogenetic analyses of a combined LSU, SSU, tef1-α and ITS sequence dataset positions our taxon in Cordycipitaceae and close to Lecanicillium sp. (CBS 639.85) and L. primulinum. Lecanicillium subprimulinum is introduced as a new species with support from molecular data.

Cymbidium xichouense (Orchidaceae; Epidendroideae), a new species from China: evidence from morphological and molecular data

Phytotaxa ◽  
2021 ◽  
Vol 484 (3) ◽  
pp. 291-297
Author(s):  
XINYU XU ◽  
CHANG-CHUN DING ◽  
WENQI HU ◽  
XIA YU ◽  
YU ZHENG ◽  
...  
Keyword(s):  
New Species ◽  
Yunnan Province ◽  
Phylogenetic Analyses ◽  
Plastid Dna ◽  
Molecular Data ◽  
Morphological Evidence ◽  
The Status ◽  
Nuclear Its ◽  
Morphological And Molecular Data ◽  
A New Species

A new species of Cymbidium (Orchidaceae), Cymbidium xichouense, from Yunnan Province, China, is described and illustrated based on morphological evidence and molecular analyses. The new orchid is morphologically similar to C. qinbeiense, but it has several morphological features that distinguish it from C. qiubeinense and all other recognized species in Cymbidium. Phylogenetic analyses based on nuclear (ITS) and plastid DNA (matK) were conducted, and the results also supported the status of C. xichouense as a new species, which is sister to C. qiubeiense.

Integrative taxonomy of the Asian skinks Sphenomorphus stellatus (Boulenger, 1900) and S. praesignis (Boulenger, 1900) with the resurrection of S. annamiticus (Boettger, 1901) and the description of a new species from Cambodia

Zootaxa ◽  
2019 ◽  
Vol 4683 (3) ◽  
pp. 381-411 ◽  
Author(s):  
L. LEE GRISMER ◽  
PERRY L., JR. WOOD ◽  
EVAN S. H. QUAH ◽  
SHAHRUL ANUAR ◽  
NIKOLAY A. POYARKOV ◽  
...  
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Molecular Data ◽  
Color Pattern ◽  
Integrative Taxonomy ◽  
Peninsular Malaysia ◽  
Wildlife Sanctuary ◽  
Molecular Phylogenetic ◽  
Univariate Analyses ◽  
A New Species

Molecular phylogenetic analyses of the sister species Sphenomorphus stellatus and S. praesignis based on the mitochondrial genes 12S and 16S rRNA recover the former as paraphyletic with respect to the latter in that a specimen of S. stellatus from the type locality in Peninsular Malaysia is more closely related to S. praesignis than to Indochinese populations of S. stellatus. Furthermore, the phylogeny indicates that the Indochinese populations represent two species, thus resulting in four major lineages within this clade. These relationships are consistent with multivariate and univariate analyses of morphological and discrete color pattern data which statistically define and diagnose the four lineages and together with the molecular data, provide the foundation for robust, testable, species-level hypotheses. As such, S. stellatus is herein restricted to Peninsular Malaysia; S. annamiticus is resurrected for the circum-continental populations ranging through southeastern Thailand, southern Cambodia, and southern Vietnam; a new species—S. preylangensis sp. nov.—is described from an isolated mountain, Phnom Chi, from the Prey Lang Wildlife Sanctuary in central Cambodia; and the taxonomy of S. praesignis remains unchanged. The description of S. preylangensis sp. nov. underscores the necessity to conserve this remnant of lowland evergreen rainforest in the Prey Lang Wildlife Sanctuary. 

Otatea nayeeri (Poaceae: Bambusoideae: Bambuseae: Guaduinae), a new species endemic to Nayarit, Mexico

Phytotaxa ◽  
2016 ◽  
Vol 267 (3) ◽  
pp. 211 ◽  
Author(s):  
EDUARDO RUIZ-SANCHEZ ◽  
ARTURO CASTRO-CASTRO
Keyword(s):  
New Species ◽  
Tropical Dry Forest ◽  
Dry Forest ◽  
Number Of Species ◽  
Foliage Leaf ◽  
Vegetative Characters ◽  
A New Species

Otatea is the most diverse genus of Guaduinae in Mexico, with 10 described species mostly inhabiting tropical dry forest. Here, with the description of Otatea nayeeri, the number of species increases to 11. Morphologically, O. nayeeri is similar to O. reynosoana and O. transvolcanica but differs in having thin-papery and deciduous culm leaves, oral setae absent in culm leaves, developing erect and reflexed culm leaf blades, three subequal branches per node and smaller foliage leaf blades without fimbriae. A comparative table of vegetative characters, an illustration and photographs are also provided.

A new species of Heimioporus (Boletaceae) from southern China

Phytotaxa ◽  
2019 ◽  
Vol 415 (4) ◽  
pp. 179-188
Author(s):  
XIANG-NYU CHEN ◽  
MING ZHANG ◽  
TAI-HUI LI ◽  
NIAN-KAI ZENG
Keyword(s):  
New Species ◽  
Southern China ◽  
Phylogenetic Analyses ◽  
Elongation Factor ◽  
Morphological Characters ◽  
Molecular Data ◽  
Translation Elongation ◽  
Distinct Member ◽  
Elongation Factor 1 ◽  
A New Species

Heimioporus sinensis, collected from tropical and subtropical areas of China, is introduced as a new species based on both morphological characters and molecular data. The species is characterized by the purplish red to deep magenta pileus, the reticulated stipe, the irregularly reticulate to reticulate-alveolate basidiospores 11.5–13.5 × 8–9.5 μm, and a trichodermal to intricately trichodermal pileipellis. Phylogenetic analyses based on the nuc 28S rDNA D1-D2 domains (28S) and the translation elongation factor 1-α gene (tef1-α) showed that H. sinensis is a distinct member of the genus Heimioporus in the subfamily Xerocomoideae.

Two species of Agaricus subg. Minoriopsis from Mexico

Phytotaxa ◽  
2019 ◽  
Vol 404 (3) ◽  
pp. 91
Author(s):  
JIE CHEN ◽  
PHILIPPE CALLAC ◽  
RÉGULO CARLOS LLARENA-HERNÁNDEZ ◽  
GERARDO GERARDO MATA
Keyword(s):  
New Species ◽  
New Record ◽  
Phylogenetic Analyses ◽  
Morphological Characteristics ◽  
Molecular Data ◽  
Edible Fungi ◽  
The World ◽  
Wild Edible Fungi ◽  
A New Species ◽  
Taxonomic System

Agaricus is a species-rich genus with more than 500 species over the world. Recent studies on tropical Agaricus revealed new tropical clades and a revised taxonomic system was consequently developed. Agaricus subg. Minoriopsis, a sixth subgenus was recently added, comprising species exclusively from the Americas. The diversity of Agaricus is little studied in Mexico, despite this country has a long history in the consumption of wild edible fungi. In this paper, we introduce a new species A. guzmanii and a new record for A. globocystidiatus from Mexico based on morphological characteristics and molecular data. Phylogenetic analyses indicate that they belong to A. subg. Minoriopsis.

A new species of Physaloptera (Nematoda: Spirurida) from Proechimys gardneri (Rodentia: Echimyidae) from the Amazon rainforest and molecular phylogenetic analyses of the genus

2019 ◽  
Vol 94 ◽  
Author(s):  
A. Maldonado ◽  
R.O. Simões ◽  
J. São Luiz ◽  
S.F. Costa-Neto ◽  
R.V. Vilela
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Molecular Data ◽  
Amazon Rainforest ◽  
Ancestral State ◽  
Intermediate Hosts ◽  
The Status ◽  
Molecular Phylogenetic ◽  
History Of ◽  
A New Species

Abstract Nematodes of the genus Physaloptera are globally distributed and more than 100 species are known. Their life cycle involves insects, including beetles, cockroaches and crickets, as intermediate hosts. This study describes a new species of Physaloptera and reports molecular phylogenetic analyses to determine its relationships within the family Physalopteridae. Physaloptera amazonica n. sp. is described from the stomach of the caviomorph rodent Proechimys gardneri collected in the Amazon rainforest in the state of Acre, Brazil. The species is characterized by the male having the first and second pair of sessile papillae asymmetrically placed, lacking a median papilla-like protuberance between the third pairs of sessile papillae, differentiated by size and shape of the spicules, while females have four uterine branches. For both nuclear 18S rRNA and MT-CO1 gene-based phylogenies, we recovered Turgida sequences forming a clade nested within Physaloptera, thus making Physaloptera paraphyletic to the exclusion of Turgida, suggesting that the latter may have evolved from the former monodelphic ancestral state to a derived polydelphic state, or that some species of Physaloptera may belong to different genera. Relationships between most taxa within Physaloptera were poorly resolved in our phylogenies, producing multifurcations or a star phylogeny. The star-like pattern may be attributed to evolutionary processes where past simultaneous species diversification events took place. Physaloptera amazonica n. sp. formed an independent lineage, separately from the other species of Physaloptera, thus supporting the status of a new species. However, all molecular data suggested a closer relationship with other Neotropical species. In conclusion, we added a new species to this already largely diverse genus Physaloptera, bringing new insights to its phylogenetic relationships. Further analyses, adding more species and markers, should provide a better understanding of the evolutionary history of physalopterids.

A new species of the Ranunculaceae from southwestern China based on morphological and molecular data

Phytotaxa ◽  
2016 ◽  
Vol 283 (1) ◽  
pp. 43 ◽  
Author(s):  
BING LIU ◽  
YUN-QING HAO ◽  
YONG YANG ◽  
TIAN-TIAN SUN ◽  
YANG-JUN LAI ◽  
...  
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Conservation Status ◽  
Molecular Data ◽  
Southwestern China ◽  
Leaf Margin ◽  
Molecular Systematic ◽  
Field Investigations ◽  
Morphological And Molecular Data ◽  
A New Species

Based on field investigations, morphological and molecular systematic studies, a new species, Caltha dysosmoides (Ranunculaceae) from southwestern China is described. It differs from all other known congeneric species by the densely dentate leaf margin, the pendulous pedicels, the scarlet flowers, the compressed filaments, and the triangular connective. To better understand taxonomy of this new species, phylogenetic analyses were conducted using a combined dataset from nrITS, plastid trnL-trnF region, and atpB-rbcL spacer. The results indicate that Caltha is monophyletic and C. dysosmoides is sister to C. sinogracilis. The conservation status of the new species is categorized as CR based on IUCN criteria.

A new species of Diporiphora from the Goneaway Tablelands of Western Queensland

Zootaxa ◽  
2012 ◽  
Vol 3556 (1) ◽  
pp. 39 ◽  
Author(s):  
PATRICK COUPER ◽  
JANE MELVILLE ◽  
ANGUS EMMOTT ◽  
STEPHANIE N. J. CHAPPLE
Keyword(s):  
New Species ◽  
Genetic Study ◽  
Morphological Study ◽  
Phylogenetic Analyses ◽  
Molecular Data ◽  
Protein Coding ◽  
Evolutionary Lineage ◽  
Body Patterns ◽  
A New Species ◽  
Evolutionary Lineages

Australia’s agamid genus Diporiphora is speciose and widespread, however, there remain significant taxonomicuncertainties within this group. Field collections across the range of Diporiphora continue to uncover undocumentedmorphological and ecological variation. A new morpho-type was collected from hard pebbly soils on Valetta Station,western Queensland, providing ample data for the description of a new species (Diporiphora ameliae sp. nov.). Weundertook a morphological study, integrated with a comprehensive genetic study to provide the phylogenetic placementand distinctiveness of the new species. Although superficially similar to Diporiphora winneckei, the new species ischaracterised by well developed ventral body patterns consisting of four longitudinal grey stripes on a cream backgroundand three distinctive dark V-shaped markings that converge anteriorly on the throat and gular area. Molecular data ispresented incorporating a ~1200 bp of the mtDNA protein-coding gene ND2 and five flanking tRNAs for 58 newsequences and 53 previously published sequences. Phylogenetic analyses of the molecular data strongly support the newspecies as an independent evolutionary lineage within Diporiphora. In addition, the molecular data also showed that thereis far greater diversity in Diporiphora winneckei sensu lato than was anticipated. Our results clearly indicate that there are at least three independent evolutionary lineages of D. winneckei-like dragons.

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