scholarly journals Deep learning based approach for optic disc and optic cup semantic segmentation for glaucoma analysis in retinal fundus images

Author(s):  
Dunja Božić-Štulić ◽  
Maja Braović ◽  
Darko Stipaničev

Optic disc and optic cup are one of the most recognized retinal landmarks, and there are numerous methods for their automatic detection. Segmented optic disc and optic cup are useful in providing the contextual information about the retinal image that can aid in the detection of other retinal features, but it is also useful in the automatic detection and monitoring of glaucoma. This paper proposes a deep learning based approach for the automatic optic disc and optic cup semantic segmentation, but also the new model for possible glaucoma detection. The proposed method was trained on DRIVE and DIARETDB1 image datasets and evaluated on MESSIDOR dataset, where it achieved the average accuracy of 97.3% of optic disc and 88.1% of optic cup. Detection rate of glaucoma diesis is 96.75%

2021 ◽  
Author(s):  
Mohammed Yousef Salem Ali ◽  
Mohamed Abdel-Nasser ◽  
Mohammed Jabreel ◽  
Aida Valls ◽  
Marc Baget

The optic disc (OD) is the point where the retinal vessels begin. OD carries essential information linked to Diabetic Retinopathy and glaucoma that may cause vision loss. Therefore, accurate segmentation of the optic disc from eye fundus images is essential to develop efficient automated DR and glaucoma detection systems. This paper presents a deep learning-based system for OD segmentation based on an ensemble of efficient semantic segmentation models for medical image segmentation. The aggregation of the different DL models was performed with the ordered weighted averaging (OWA) operators. We proposed the use of a dynamically generated set of weights that can give a different contribution to the models according to their performance during the segmentation of OD in the eye fundus images. The effectiveness of the proposed system was assessed on a fundus image dataset collected from the Hospital Sant Joan de Reus. We obtained Jaccard, Dice, Precision, and Recall scores of 95.40, 95.10, 96.70, and 93.90%, respectively.


2021 ◽  
Author(s):  
Shima Mohammadali Pishnamaz

Ophthalmologists have widely used retinal fundus imaging systems to examine the health of the optic nerve, vitreous, macula, retina and their blood vessels. Many critical diseases, such as glaucoma and diabetic retinopathy, can be diagnosed by analyzing retinal fundus images. Retinal image-based glaucoma detection is a comprehensive diagnostic approach that examines the head cup-to-disc ratio (CDR) as an important indicator for detecting the presence and the extent of glaucoma in a patient. The accurate segmentations of the optic disc (OD) and optic cup (OC) are critical for the calculation of CDR. Machine learning based algorithms can be very helpful to efficiently exploit the vast amounts of retinal fundus data. In this thesis project, the main goal is to develop image processing and machine learning algorithms to automatically detect OD and OC from fundus images. This goal has been achieved by developing and applying several image enhancement techniques. First, an algorithm is proposed and tested on several fundus images to detect OD. The proposed algorithm is based on a combination of Contrast Limited Adaptive Histogram Equalization (CLAHE), Alternating Sequential Filters (ASF), thresholding, and Circular Hough Transform (CHT) methods. The results section highlights that the proposed algorithm is highly efficient in segmentation of OD from other parts of the fundus image. Several classification and modeling methods are studied in order to classify detected OD into OC and non-OC regions. In this thesis project three main ensemble modeling algorithms are studied to segment OC. The studied ensemble models are Random Forest, Gradient Boosting Machines (GBM), and Extreme Gradient Boosting Machines (XGBoost). The comparison between these models shows that they have more accurate results than conventional classification methods such as Logistic Regression (LR) or Support Vector Machines (SVM). This study shows that XGBoost is the fastest and most accurate approach to segment optic cup within the optic disc region.


Glaucoma is one of the major causes of vision loss in today’s world. Glaucoma is a disease in the eye where fluid pressure in the eye increases; if it is not timely cured, the patient may lose their vision. Glaucoma can be detected by examining boundary of optics cup and optics disc acquired from fundus images. The proposed method suggest automatic detect the boundary of optics cup and optics disc with processing of fundus images. This paper explores the new approach fast fuzzy C-mean technique for segmenting the optic disc and optic cup in fundus images. Results evaluated by fast fuzzy C mean a technique is faster than fuzzy C-mean method. The proposed method reported results to 91.91%, 90.49% and 90.17% when tested on DRIONS, DRIVE and STARE on publicly available databases of fundus images.


2021 ◽  
Author(s):  
Shima Mohammadali Pishnamaz

Ophthalmologists have widely used retinal fundus imaging systems to examine the health of the optic nerve, vitreous, macula, retina and their blood vessels. Many critical diseases, such as glaucoma and diabetic retinopathy, can be diagnosed by analyzing retinal fundus images. Retinal image-based glaucoma detection is a comprehensive diagnostic approach that examines the head cup-to-disc ratio (CDR) as an important indicator for detecting the presence and the extent of glaucoma in a patient. The accurate segmentations of the optic disc (OD) and optic cup (OC) are critical for the calculation of CDR. Machine learning based algorithms can be very helpful to efficiently exploit the vast amounts of retinal fundus data. In this thesis project, the main goal is to develop image processing and machine learning algorithms to automatically detect OD and OC from fundus images. This goal has been achieved by developing and applying several image enhancement techniques. First, an algorithm is proposed and tested on several fundus images to detect OD. The proposed algorithm is based on a combination of Contrast Limited Adaptive Histogram Equalization (CLAHE), Alternating Sequential Filters (ASF), thresholding, and Circular Hough Transform (CHT) methods. The results section highlights that the proposed algorithm is highly efficient in segmentation of OD from other parts of the fundus image. Several classification and modeling methods are studied in order to classify detected OD into OC and non-OC regions. In this thesis project three main ensemble modeling algorithms are studied to segment OC. The studied ensemble models are Random Forest, Gradient Boosting Machines (GBM), and Extreme Gradient Boosting Machines (XGBoost). The comparison between these models shows that they have more accurate results than conventional classification methods such as Logistic Regression (LR) or Support Vector Machines (SVM). This study shows that XGBoost is the fastest and most accurate approach to segment optic cup within the optic disc region.


Sensors ◽  
2022 ◽  
Vol 22 (2) ◽  
pp. 434
Author(s):  
Marriam Nawaz ◽  
Tahira Nazir ◽  
Ali Javed ◽  
Usman Tariq ◽  
Hwan-Seung Yong ◽  
...  

Glaucoma is an eye disease initiated due to excessive intraocular pressure inside it and caused complete sightlessness at its progressed stage. Whereas timely glaucoma screening-based treatment can save the patient from complete vision loss. Accurate screening procedures are dependent on the availability of human experts who performs the manual analysis of retinal samples to identify the glaucomatous-affected regions. However, due to complex glaucoma screening procedures and shortage of human resources, we often face delays which can increase the vision loss ratio around the globe. To cope with the challenges of manual systems, there is an urgent demand for designing an effective automated framework that can accurately identify the Optic Disc (OD) and Optic Cup (OC) lesions at the earliest stage. Efficient and effective identification and classification of glaucomatous regions is a complicated job due to the wide variations in the mass, shade, orientation, and shapes of lesions. Furthermore, the extensive similarity between the lesion and eye color further complicates the classification process. To overcome the aforementioned challenges, we have presented a Deep Learning (DL)-based approach namely EfficientDet-D0 with EfficientNet-B0 as the backbone. The presented framework comprises three steps for glaucoma localization and classification. Initially, the deep features from the suspected samples are computed with the EfficientNet-B0 feature extractor. Then, the Bi-directional Feature Pyramid Network (BiFPN) module of EfficientDet-D0 takes the computed features from the EfficientNet-B0 and performs the top-down and bottom-up keypoints fusion several times. In the last step, the resultant localized area containing glaucoma lesion with associated class is predicted. We have confirmed the robustness of our work by evaluating it on a challenging dataset namely an online retinal fundus image database for glaucoma analysis (ORIGA). Furthermore, we have performed cross-dataset validation on the High-Resolution Fundus (HRF), and Retinal Image database for Optic Nerve Evaluation (RIM ONE DL) datasets to show the generalization ability of our work. Both the numeric and visual evaluations confirm that EfficientDet-D0 outperforms the newest frameworks and is more proficient in glaucoma classification.


2019 ◽  
Vol 19 (1) ◽  
Author(s):  
Muhammad Naseer Bajwa ◽  
Muhammad Imran Malik ◽  
Shoaib Ahmed Siddiqui ◽  
Andreas Dengel ◽  
Faisal Shafait ◽  
...  

Sign in / Sign up

Export Citation Format

Share Document