scholarly journals rboAnalyzer: A Software to Improve Characterization of Non-coding RNAs From Sequence Database Search Output

2020 ◽  
Vol 11 ◽  
Author(s):  
Marek Schwarz ◽  
Jiří Vohradský ◽  
Martin Modrák ◽  
Josef Pánek
2018 ◽  
Vol 18 (2) ◽  
pp. 652-663 ◽  
Author(s):  
Kristian E. Swearingen ◽  
Jimmy K. Eng ◽  
David Shteynberg ◽  
Vladimir Vigdorovich ◽  
Timothy A. Springer ◽  
...  

PROTEOMICS ◽  
2006 ◽  
Vol 6 (4) ◽  
pp. 1121-1132 ◽  
Author(s):  
Gun Wook Park ◽  
Kyung-Hoon Kwon ◽  
Jin Young Kim ◽  
Jeong Hwa Lee ◽  
Sung-Ho Yun ◽  
...  

PROTEOMICS ◽  
2012 ◽  
Vol 13 (1) ◽  
pp. 22-24 ◽  
Author(s):  
Jimmy K. Eng ◽  
Tahmina A. Jahan ◽  
Michael R. Hoopmann

2020 ◽  
Vol 20 ◽  
Author(s):  
Ammad Ahmad Farooqi ◽  
Evangelia Legaki ◽  
Maria Gazouli ◽  
Silvia Rinaldi ◽  
Rossana Berardi

: Central dogma of molecular biology has remained cornerstone of classical molecular biology but serendipitous discovery of microRNAs (miRNAs) in nematodes paradigmatically shifted our current understanding of the intricate mech-anisms which occur during transitions from transcription to translation. Discovery of miRNA captured tremendous attention and appreciation and we had witnessed an explosion in the field of non-coding RNAs. Ground-breaking discoveries in the field of non-coding RNAs have helped in better characterization of microRNAs and long non-coding RNAs (LncRNAs). There is an ever-increasing list of miRNA targets which are regulated by MALAT1 to stimulate or repress expression of tar-get genes. However, in this review our main focus is to summarize mechanistic insights related to MALAT1-mediated regu-lation of oncogenic signaling pathways. We have discussed how MALAT1 modulated TGF/SMAD and Hippo pathways in various cancers. We have also comprehensively summarized how JAK/STAT and Wnt/β-catenin pathways stimulated MALAT1 expression and consequentially how MALAT1 potentiated these signaling cascades to promote cancer. MALAT1 research has undergone substantial broadening however, there is still a need to identify additional mechanisms. MALAT1 is involved in multi-layered regulation of multiple transduction cascades and detailed analysis of different pathways will be helpful in getting a step closer to individualized medicine.


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