scholarly journals GmIDL2a and GmIDL4a, Encoding the Inflorescence Deficient in Abscission-Like Protein, Are Involved in Soybean Cell Wall Degradation during Lateral Root Emergence

2018 ◽  
Vol 19 (8) ◽  
pp. 2262 ◽  
Author(s):  
Chen Liu ◽  
Chunyu Zhang ◽  
Mingxia Fan ◽  
Wenjuan Ma ◽  
Meiming Chen ◽  
...  
Keyword(s):  
Gene Expression ◽  
Cell Wall ◽  
Lateral Root ◽  
Cell Layer ◽  
Lateral Roots ◽  
Soybean Genome ◽  
Cell Wall Degradation ◽  
Primary Roots ◽  
Cell Wall Remodeling ◽  
Soybean Cell

The number of lateral roots (LRs) of a plant determines the efficiency of water and nutrient uptake. Soybean is a typical taproot crop which is deficient in LRs. The number of LRs is therefore an important agronomic trait in soybean breeding. It is reported that the inflorescence deficient in abscission (IDA) protein plays an important role in the emergence of Arabidopsis LRs. Previously, the genes which encode IDA-like (IDL) proteins have been identified in the soybean genome. However, the functions of these genes in LR development are unknown. Therefore, it is of great value to investigate the function of IDL genes in soybean. In the present study, the functions of two root-specific expressed IDL genes, GmIDL2a and GmIDL4a, are investigated. The expressions of GmIDL2a and GmIDL4a, induced by auxin, are located in the overlaying tissue, where LRs are initiated. Overexpression of GmIDL2a and GmIDL4a increases the LR densities of the primary roots, but not in the elder root. Abnormal cell layer separation has also been observed in GmIDL2a- and GmIDL4a-overexpressing roots. These results suggest that the overlaying tissues of GmIDL2a- and GmIDL4a-overexpressing roots are looser and are suitable for the emergence of the LR primordium. Further investigation shows that the expression of some of the cell wall remodeling (CWR) genes, such as xyloglucan endotransglucosylase/hydrolases, expansins, and polygalacturonases, are increased when GmIDL2a and GmIDL4a are overexpressed in hairy roots. Here, we conclude that GmIDL2a and GmIDL4a function in LR emergence through regulating soybean CWR gene expression.

scholarly journals Expression Studies on AUX1-like Genes in Medicago truncatula Suggest That Auxin Is Required at Two Steps in Early Nodule Development

2001 ◽  
Vol 14 (3) ◽  
pp. 267-277 ◽  
Author(s):  
Françoise de Billy ◽  
Cathy Grosjean ◽  
Sean May ◽  
Malcolm Bennett ◽  
Julie V. Cullimore
Keyword(s):  
Medicago Truncatula ◽  
Lateral Root ◽  
Sequence Similarity ◽  
Lateral Roots ◽  
Peripheral Region ◽  
Nodule Development ◽  
Central Position ◽  
Root Tips ◽  
High Sequence Similarity ◽  
Primary Roots

Medicago truncatula contains a family of at least five genes related to AUX1 of Arabidopsis thaliana (termed MtLAX genes for Medicago truncatula-like AUX1 genes). The high sequence similarity between the encoded proteins and AUX1 implies that the MtLAX genes encode auxin import carriers. The MtLAX genes are expressed in roots and other organs, suggesting that they play pleiotropic roles related to auxin uptake. In primary roots, the MtLAX genes are expressed preferentially in the root tips, particularly in the provascular bundles and root caps. During lateral root and nodule development, the genes are expressed in the primordia, particularly in cells that were probably derived from the pericycle. At slightly later stages, the genes are expressed in the regions of the developing organs where the vasculature arises (central position for lateral roots and peripheral region for nodules). These results are consistent with MtLAX being involved in local auxin transport and suggest that auxin is required at two common stages of lateral root and nodule development: development of the primordia and differentiation of the vasculature.

scholarly journals ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 1 (ADPG1) releases latent defense signals in stems with reduced lignin content

2020 ◽  
Vol 117 (6) ◽  
pp. 3281-3290 ◽  
Author(s):  
Lina Gallego-Giraldo ◽  
Chang Liu ◽  
Sara Pose-Albacete ◽  
Sivakumar Pattathil ◽  
Angelo Gabriel Peralta ◽  
...  
Keyword(s):  
Gene Expression ◽  
Cell Wall ◽  
Plant Cell ◽  
Plant Cell Wall ◽  
Lignin Content ◽  
Ectopic Expression ◽  
Cell Wall Degrading Enzymes ◽  
Down Regulation ◽  
Dehiscence Zone ◽  
Cell Wall Remodeling

There is considerable interest in engineering plant cell wall components, particularly lignin, to improve forage quality and biomass properties for processing to fuels and bioproducts. However, modifying lignin content and/or composition in transgenic plants through down-regulation of lignin biosynthetic enzymes can induce expression of defense response genes in the absence of biotic or abiotic stress. Arabidopsis thaliana lines with altered lignin through down-regulation of hydroxycinnamoyl CoA:shikimate/quinate hydroxycinnamoyl transferase (HCT) or loss of function of cinnamoyl CoA reductase 1 (CCR1) express a suite of pathogenesis-related (PR) protein genes. The plants also exhibit extensive cell wall remodeling associated with induction of multiple cell wall-degrading enzymes, a process which renders the corresponding biomass a substrate for growth of the cellulolytic thermophile Caldicellulosiruptor bescii lacking a functional pectinase gene cluster. The cell wall remodeling also results in the release of size- and charge-heterogeneous pectic oligosaccharide elicitors of PR gene expression. Genetic analysis shows that both in planta PR gene expression and release of elicitors are the result of ectopic expression in xylem of the gene ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 1 (ADPG1), which is normally expressed during anther and silique dehiscence. These data highlight the importance of pectin in cell wall integrity and the value of lignin modification as a tool to interrogate the informational content of plant cell walls.

scholarly journals A Kinetic Analysis of the Auxin Transcriptome Reveals Cell Wall Remodeling Proteins That Modulate Lateral Root Development in Arabidopsis

2013 ◽  
Vol 25 (9) ◽  
pp. 3329-3346 ◽  
Author(s):  
Daniel R. Lewis ◽  
Amy L. Olex ◽  
Stacey R. Lundy ◽  
William H. Turkett ◽  
Jacquelyn S. Fetrow ◽  
...  
Keyword(s):  
Cell Wall ◽  
Kinetic Analysis ◽  
Root Development ◽  
Lateral Root ◽  
Lateral Root Development ◽  
Cell Wall Remodeling

Analysis of lateral root growth in Arabidopsis in response to physiologically active auxin analogues

2010 ◽  
Vol 58 (1) ◽  
pp. 1-10 ◽  
Author(s):  
L. Novickienė ◽  
V. Gavelienė ◽  
L. Miliuvienė ◽  
D. Kazlauskienė ◽  
L. Pakalniškytė
Keyword(s):  
Lateral Root ◽  
Apical Meristem ◽  
Lateral Roots ◽  
Root System Architecture ◽  
Test Plant ◽  
Wild Type ◽  
Root Primordia ◽  
Lateral Root Primordia ◽  
Primary Roots ◽  
The Impact

The aim of this work was to investigate the formation and development of lateral roots in model trials on Arabidopsis thaliana L. Heynh wild type (Col-0), the alf4-1 mutant and its allele by applying the physiologically active auxin analogues IBA, IAA, TA-12 and TA-14.Differences were observed between the alf4-1 mutant and its allele phenotype in the formation of lateral roots. The application of auxin analogues was unable to restore the formation of lateral roots in the alf4-1 mutant. In some cases, under the impact of IBA (1 μM), a cluster of xylem cells was activated in the pericycle of the primary roots and lateral root primordia were formed. The auxin analogues induced the growth of primary roots in the alf4-1 allele and the formation and growth of lateral roots. The impact of IBA (1 μM), TA-12 (1 mM) and IAA (1 μM) was particularly evident. The intense formation of lateral roots under the impact of IBA and TA-12 could be related with the ability of these compounds to intensify mitotic activity in the apical meristem cells of the lateral roots. New data were obtained, showing that IBA and other physiologically active auxin analogues can modify the root system architecture of the test-plant Arabidopsis .

scholarly journals The Aluminum Distribution and Translocation in Two Citrus Species Differing in Aluminum Tolerance

2021 ◽  
Author(s):  
Han Zhang ◽  
Xin-yu Li ◽  
Mei-lan Lin ◽  
Ping-ping Hu ◽  
Ning-wei Lai ◽  
...  
Keyword(s):  
Cell Wall ◽  
Lateral Root ◽  
Lateral Roots ◽  
Al Toxicity ◽  
Root Cell ◽  
Cell Organelle ◽  
Citrus Species ◽  
Al Tolerance ◽  
Al Distribution ◽  
Root Cell Wall

Abstract Background: Many citrus orchards of south China suffer from soil acidification, which induced aluminum (Al) toxicity. The Al-immobilization in vivo is crucial for Al detoxification. However, the distribution and translocation of excess Al in citrus species were not well illustrated.Results: The seedlings of ‘Xuegan’ [Citrus sinensis (L.) Osbeck] and ‘Shatianyou’ [Citrus grandis (L.) Osbeck] that differed in Al tolerance were hydroponically treated with nutrient solution (Control) or supplemented by 1.0 mM Al3+ (Al toxicity) for 21 days after three months of pre-culture. The Al distribution at the tissue level of citrus species following the order: lateral roots > primary roots > leaves > stems. The fragmentation of fresh lateral roots revealed the ratio of Al distribution at the cell wall, cell organelle and cytoplasmic supernatant was about 8:2:1 of two citrus species under Al stress. Besides, the Al distribution at the lateral root cell wall components suggested the pectin is the most Al-accumulating site in citrus species. Compared to C. grandis, C. sinensis had a significantly higher Al concentration on the cell wall of lateral roots whereas remarkably lower Al levels on the leaves and stems. Furthermore, the Al translocation revealed by the absorption kinetics of the cell wall demonstrated that C. sinensis had a higher Al retention and stronger Al affinity on the root cell wall than C. grandis. According to the FTIR (Fourier transform infrared spectroscopy) analysis, the Al distribution and translocation might be affected by modifying the structure and components of the citrus lateral root cell wall. Conclusions: A higher Al-retention, mainly targeted by the pectin of the root cell wall, and a lower Al translocation efficiency from roots to shoots contributed to a higher Al tolerance of C. sinensis than C. grandis.

scholarly journals In silico analyses of pericycle cell populations reinforce their relation with associated vasculature in Arabidopsis

2012 ◽  
Vol 367 (1595) ◽  
pp. 1479-1488 ◽  
Author(s):  
Boris Parizot ◽  
Ianto Roberts ◽  
Jeroen Raes ◽  
Tom Beeckman ◽  
Ive De Smet
Keyword(s):  
Gene Expression ◽  
Lateral Root ◽  
Vascular Tissue ◽  
Lateral Roots ◽  
Specific Expression ◽  
Concentric Layer ◽  
Small Set ◽  
Specific Proteins ◽  
In Silico Analyses ◽  
Pericycle Cells

In Arabidopsis , lateral root initiation occurs in a subset of pericycle cells at the xylem pole that will divide asymmetrically to give rise to a new lateral root organ. While lateral roots never develop at the phloem pole, it is unclear how the interaction with xylem and phloem poles determines the distinct pericycle identities with different competences. Nevertheless, pericycle cells at these poles are marked by differences in size, by ultrastructural features and by specific proteins and gene expression. Here, we provide transcriptional evidence that pericycle cells are intimately associated with their vascular tissue instead of being a separate concentric layer. This has implications for the identification of cell- and tissue-specific promoters that are necessary to drive and/or alter gene expression locally, avoiding pleiotropic effects. We were able to identify a small set of genes that display specific expression in the phloem or xylem pole pericycle cells, and we were able to identify motifs that are likely to drive expression in either one of those tissues.

Sign in / Sign up

Export Citation Format

Share Document