Faculty Opinions recommendation of Short RNAs are transcribed from repressed polycomb target genes and interact with polycomb repressive complex-2.

Author(s):  
John Cambier ◽  
Arnaud Van Den Broeck
2010 ◽  
Vol 38 (5) ◽  
pp. 675-688 ◽  
Author(s):  
Aditi Kanhere ◽  
Keijo Viiri ◽  
Carla C. Araújo ◽  
Jane Rasaiyaah ◽  
Russell D. Bouwman ◽  
...  

Nature ◽  
2010 ◽  
Vol 464 (7286) ◽  
pp. 306-310 ◽  
Author(s):  
Diego Pasini ◽  
Paul A. C. Cloos ◽  
Julian Walfridsson ◽  
Linda Olsson ◽  
John-Paul Bukowski ◽  
...  

eLife ◽  
2016 ◽  
Vol 5 ◽  
Author(s):  
Nathan R Rose ◽  
Hamish W King ◽  
Neil P Blackledge ◽  
Nadezda A Fursova ◽  
Katherine JI Ember ◽  
...  

Polycomb group (PcG) proteins function as chromatin-based transcriptional repressors that are essential for normal gene regulation during development. However, how these systems function to achieve transcriptional regulation remains very poorly understood. Here, we discover that the histone H2AK119 E3 ubiquitin ligase activity of Polycomb repressive complex 1 (PRC1) is defined by the composition of its catalytic subunits and is highly regulated by RYBP/YAF2-dependent stimulation. In mouse embryonic stem cells, RYBP plays a central role in shaping H2AK119 mono-ubiquitylation at PcG targets and underpins an activity-based communication between PRC1 and Polycomb repressive complex 2 (PRC2) which is required for normal histone H3 lysine 27 trimethylation (H3K27me3). Without normal histone modification-dependent communication between PRC1 and PRC2, repressive Polycomb chromatin domains can erode, rendering target genes susceptible to inappropriate gene expression signals. This suggests that activity-based communication and histone modification-dependent thresholds create a localized form of epigenetic memory required for normal PcG chromatin domain function in gene regulation.


2012 ◽  
Vol 287 (13) ◽  
pp. 10509-10524 ◽  
Author(s):  
Gaylor Boulay ◽  
Marion Dubuissez ◽  
Capucine Van Rechem ◽  
Antoine Forget ◽  
Kristian Helin ◽  
...  

2008 ◽  
Vol 28 (20) ◽  
pp. 6473-6482 ◽  
Author(s):  
Tao Li ◽  
Ji-Fan Hu ◽  
Xinwen Qiu ◽  
Jianqun Ling ◽  
Huiling Chen ◽  
...  

ABSTRACT CTCF is a zinc finger DNA-binding protein that regulates the epigenetic states of numerous target genes. Using allelic regulation of mouse insulin-like growth factor II (Igf2) as a model, we demonstrate that CTCF binds to the unmethylated maternal allele of the imprinting control region (ICR) in the Igf2/H19 imprinting domain and forms a long-range intrachromosomal loop to interact with the three clustered Igf2 promoters. Polycomb repressive complex 2 is recruited through the interaction of CTCF with Suz12, leading to allele-specific methylation at lysine 27 of histone H3 (H3-K27) and to suppression of the maternal Igf2 promoters. Targeted mutation or deletion of the maternal ICR abolishes this chromatin loop, decreases allelic H3-K27 methylation, and causes loss of Igf2 imprinting. RNA interference knockdown of Suz12 also leads to reactivation of the maternal Igf2 allele and biallelic Igf2 expression. CTCF and Suz12 are coprecipitated from nuclear extracts with antibodies specific for either protein, and they interact with each other in a two-hybrid system. These findings offer insight into general epigenetic mechanisms by which CTCF governs gene expression by orchestrating chromatin loop structures and by serving as a DNA-binding protein scaffold to recruit and bind polycomb repressive complexes.


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