scholarly journals DNAqua-Net or how to navigate on the stormy waters of standards and legislations

2018 ◽  
Vol 2 ◽  
pp. e25953 ◽  
Author(s):  
Patricia Mergen ◽  
Kristian Meissner ◽  
Daniel Hering ◽  
Florian Leese ◽  
Agnès Bouchez ◽  
...  

Several national and international environmental laws require countries to meet clearly defined targets with respect to the ecological status of aquatic ecosystems. In Europe, the EU-Water Framework Directive (WFD; 2000/60/EC) represents such a detailed piece of legislation. The WFD that requires the European member countries to achieve an at least ‘good’ ecological status of all surface waters at latest by the year 2027. In order to assess the ecological status of a given water body under the WFD, data on its aquatic biodiversity are obtained and compared to reference status. The mismatch between these two metrics then is used to derive the respective ecological status class. While the workflow to carry out the assessment is well established, it relies only on few biological groups (typically fish, macroinvertebrates and a few algal taxa such as diatoms), is time consuming and remains at a lower taxonomic resolution, so that the identifications can be done routinely by non-experts with an acceptable learning curve. Here, novel genetic and genomic tools provide new solutions to speed up the process and allow to include a much greater proportion of biodiversity in the assessment process. further, results are easily comparable through the genetic ‘barcodes’ used to identify organisms. The aim of the large international COST Action DNAqua-Net (http://dnaqua.net/) is to develop strategies on how to include novel genetic tools in bioassessment of aquatic ecosystems in Europe and beyond and how to standardize these among the participating countries. It is the ambition of the network to have these new genetic tools accepted in future legal frameworks such as the EU-Water Framework Directive (WFD; 2000/60/EC) and the Marine Strategy Framework Directive (2008/56/EC). However, a prerequisite is that various aspects that start from the validation and completion of DNA Barcode reference databases, to the lab and field protocols, to the analysis processes as well as the subsequently derived biotic indices and metrics are dealt with and commonly agreed upon. Furthermore, many pragmatic questions such as adequate short and long-term storage of samples or specimens for further processing or to serve as an accessible reference need also be addressed. In Europe the conformity and backward compatibility of the new methods with the existing legislation and workflows are further of high importance. Without rigorous harmonization and inter-calibration concepts, the implementation of the powerful new genetic tools will be substantially delayed in real-world legal framework applications. After a short introduction on the structure and vision of DNAqua-Net, we discuss how the DNAqua-Net community considers possibilities to include novel DNA-based approaches into current bioassessment and how formal standardization e.g. through the framework of CEN (The European Committee for Standardization) may aid in that process (Hering et al. 2018, Leese et al. 2016, Leese et al. 2018. Further we explore how TDWG data standards can further facilitate swift adoption of the genetic methods in routine use. We further present potential impacts of the legislative requirements of the Nagoya Protocol on the exchange of genetic resources and their implications for biomonitoring. Last but not least, we will touch upon the rather unexpected influence that the new General Data Protection Regulation (GDPR) may have on the bioassessment work in practice.

AMBIO ◽  
2021 ◽  
Author(s):  
Bent T. Christensen ◽  
Birger F. Pedersen ◽  
Jørgen E. Olesen ◽  
Jørgen Eriksen

AbstractThe EU Water Framework Directive (WFD) aims to protect the ecological status of coastal waters. To establish acceptable boundaries between good and moderate ecological status, the WFD calls for reference conditions practically undisturbed by human impact. For Denmark, the nitrogen (N) concentrations present around year 1900 have been suggested to represent reference conditions. As the N load of coastal waters relates closely to runoff from land, any reduction in load links to agricultural activity. We challenge the current use of historical N balances to establish WFD reference conditions and initiate an alternative approach based on parish-level land-use statistics collected 1896/1900 and N concentrations in root zone percolates from experiments with year 1900-relevant management. This approach may be more widely applicable for landscapes with detailed historic information on agricultural activity. Using this approach, we find an average N concentration in root zone percolates that is close to that of current agriculture. Thus, considering Danish coastal waters to be practically unaffected by human activity around year 1900 remains futile as 75% of the land area was subject to agricultural activity with a substantial potential for N loss to the environment. It appears unlikely that the ecological state of coastal waters around year 1900 may serve as WFD reference condition.


2021 ◽  
Vol 27 (3) ◽  
pp. 48-67
Author(s):  
M. O’Reilly ◽  
J. Boyle ◽  
S. Nowacki ◽  
M. Elliott ◽  
R. Foster

The history of monitoring transitional water fish in Scotland is briefly outlined. The requirements of the EU Water Framework Directive are explained and how this applies to the monitoring of transitional water fish communities in Scotland is described. The development of a monitoring programme for Scotland is outlined, including sampling methods and strategies. Six transitional waters were selected as representative for Scotland covering three different types of transitional water. A multi-metric tool, the Transitional Water Fish Classification Index was used to assess the ecological status of the fish communities in these waters and the operation of the different metrics and the creation of appropriate reference conditions is explained. The assessment tool was applied to survey data from 2005 to 2018, although only the more recent data fully met the tool requirements. The species composition and abundances in the respective transitional waters were compared. The fully valid surveys were all classed as of Good or High status, indicating the fish communities in all the representative transitional waters appeared to be in good ecological health. The efficacy of the different metrics is considered and some issues with Metric 2, enumerating migratory species, are discussed at length. A new multi-metric tool, the Estuarine Multi-metric Fish Index, is briefly discussed and its introduction for the assessments in Scotland is recommended.


2007 ◽  
Vol 11 ◽  
pp. 101-105
Author(s):  
H. Nacken

Abstract. Hydromorphological deficits are of real concern regarding the goals of the European Water Framework Directive to reach a good ecological status. The effects of measures that change the morphological structure of a river is hard to predict. Existing methods to simulate this process in a traditional numerical model can not be applied to whole river systems. Using a rule-based modelling concept to find feasible measures and predict the impact of those measures is a very promising solution.


2008 ◽  
Vol 65 (8) ◽  
pp. 1492-1497 ◽  
Author(s):  
Yolanda Fernández-Torquemada ◽  
Marta Díaz-Valdés ◽  
Francisco Colilla ◽  
Beatriz Luna ◽  
José Luis Sánchez-Lizaso ◽  
...  

Abstract Fernández-Torquemada, Y., Díaz-Valdés, M., Colilla, F., Luna, B., Sánchez-Lizaso, J. L., and Ramos-Esplá, A. A. 2008. Descriptors from Posidonia oceanica (L.) Delile meadows in coastal waters of Valencia, Spain, in the context of the EU Water Framework Directive. – ICES Journal of Marine Science, 65: 1492–1497. Evaluations are provided of 21 descriptors of Posidonia oceanica meadows along the coast of Valencia, Spain, with a view to using these in implementing the European Water Framework Directive (WFD). The descriptors selected are known to respond to a variety of anthropogenic disturbances. Data were collected at 17 locations during three consecutive years. A principal components analysis was used to classify the ecological status of each locality according to five classes as prescribed by the WFD. To identify the descriptors that contributed most to similarity among localities within each class and to dissimilarity between adjacent classes, a similarity percentage analysis was performed. We also correlated the descriptors with an independent set of indicators for various types of anthropogenic pressures on the water bodies associated with the different localities. The descriptors providing the most consistent information on status as well as demonstrating a significant relationship with estimated pressures were: shoot density, shoot foliar surface, dead-matte cover, meadow cover, herbivore pressure, rhizome baring/burial, foliar necrosis, percentage of plagiotropic rhizomes, and leaf-epiphyte biomass.


2008 ◽  
Vol 37 (3) ◽  
Author(s):  
Hanna Soszka ◽  
Agnieszka Kolada ◽  
Małgorzata Gołub ◽  
Dorota Cydzik

Establishing reference conditions for Polish lakes - preliminary resultsEstablishing reference conditions is essential for performing ecological status assessments of surface waters according to the EU Water Framework Directive. Ecological status is described as the deviation from undisturbed (reference) conditions. This paper presents the process of establishing preliminary reference values for chlorophyll


2018 ◽  
Vol 29 ◽  
pp. 251-259 ◽  
Author(s):  
Rasyikah Md Khalid ◽  
Mazlin Bin Mokhtar ◽  
Faridah Jalil ◽  
Suhaimi Ab Rahman ◽  
Christopher Spray

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