scholarly journals Visualizing Populated Ontologies with OntoTrix

Author(s):  
Benjamin Bach ◽  
Emmanuel Pietriga ◽  
Ilaria Liccardi

Research on visualizing Semantic Web data has yielded many tools that rely on information visualization techniques to better support the user in understanding and editing these data. Most tools structure the visualization according to the concept definitions and interrelations that constitute the ontology’s vocabulary. Instances are often treated as somewhat peripheral information, when considered at all. These instances, that populate ontologies, represent an essential part of any knowledge base. Understanding instance-level data might be easier for users because of their higher concreteness, but instances will often be orders of magnitude more numerous than the concept definitions that give them machine-processable meaning. As such, the visualization of instance-level data poses different but real challenges. The authors present a visualization technique designed to enable users to visualize large instance sets and the relations that connect them. This visualization uses both node-link and adjacency matrix representations of graphs to visualize different parts of the data depending on their semantic and local structural properties. The technique was originally devised for simple social network visualization. The authors extend it to handle the richer and more complex graph structures of populated ontologies, exploiting ontological knowledge to drive the layout of, and navigation in, the representation embedded in a smooth zoomable environment.

2005 ◽  
Vol 4 (4) ◽  
pp. 239-256 ◽  
Author(s):  
Ji Soo Yi ◽  
Rachel Melton ◽  
John Stasko ◽  
Julie A. Jacko

The use of multivariate information visualization techniques is intrinsically difficult because the multidimensional nature of data cannot be effectively presented and understood on real-world displays, which have limited dimensionalities. However, the necessity to use these techniques in daily life is increasing as the amount and complexity of data grows explosively in the information age. Thus, multivariate information visualization techniques that are easier to understand and more accessible are needed for the general population. In order to meet this need, the present paper proposes Dust & Magnet, a multivariate information visualization technique using a magnet metaphor and various interactive techniques. The intuitive magnet metaphor and subsequent interactions facilitate the ease of learning this multivariate information visualization technique. A visualization tool such as Dust & Magnet has the potential to increase the acceptance of and utility for multivariate information by a broader population of users who are not necessarily knowledgeable about multivariate information visualization techniques.


Author(s):  
Mark Newman

An introduction to the mathematical tools used in the study of networks. Topics discussed include: the adjacency matrix; weighted, directed, acyclic, and bipartite networks; multilayer and dynamic networks; trees; planar networks. Some basic properties of networks are then discussed, including degrees, density and sparsity, paths on networks, component structure, and connectivity and cut sets. The final part of the chapter focuses on the graph Laplacian and its applications to network visualization, graph partitioning, the theory of random walks, and other problems.


Author(s):  
Weksi Budiaji

A silhouette index is a well-known measure of an internal criteria validation for the clustering algorithm results. While it is a medoid-based validation index, a centroid-based validation index that is called a centroid-based shadow value (CSV) has been developed.  Although both are similar, the CSV has an additional unique property where an image of a 2-dimensional neighborhood graph is possible. A new internal validation index is proposed in this article in order to create a medoid-based validation that has an ability to visualize the results in a 2-dimensional plot. The proposed index behaves similarly to the silhouette index and produces a network visualization, which is comparable to the neighborhood graph of the CSV. The network visualization has a multiplicative parameter (c) to adjust its edges visibility. Due to the medoid-based, in addition, it is more an appropriate visualization technique for any type of data than a neighborhood graph of the CSV.


Themes and examples examined in this chapter discuss the fast growing field of visualization. First, basic terms: data, information, knowledge, dimensions, and variables are discussed before going into the visualization issues. The next part of the text overviews some of the basics in visualization techniques: data-, information-, and knowledge-visualization, and tells about tools and techniques used in visualization such as data mining, clusters and biclustering, concept mapping, knowledge maps, network visualization, Web-search result visualization, open source intelligence, visualization of the Semantic Web, visual analytics, and tag cloud visualization. This is followed by some remarks on music visualization. The next part of the chapter is about the meaning and the role of visualization in various kinds of presentations. Discussion relates to concept visualization in visual learning, visualization in education, collaborative visualization, professions that employ visualization skills, and well-known examples of visualization that progress science. Comments on cultural heritage knowledge visualization conclude the chapter.


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