Optimization of EMS Mutagenesis on Petunia for TILLING

Author(s):  
Jiang P Chen Y ◽  
Wilde HD
Keyword(s):  
2004 ◽  
Vol 9 (2) ◽  
pp. 187-189
Author(s):  
Sun-Hye Kim ◽  
Yu-Mi Ha ◽  
Hyoung-Joon Youm ◽  
Gil-Hwan An ◽  
Bong-Duk Lee ◽  
...  

Genetics ◽  
2002 ◽  
Vol 160 (3) ◽  
pp. 1051-1065
Author(s):  
Claudia B Zraly ◽  
Yun Feng ◽  
Andrew K Dingwall

Abstract We identified and characterized the Drosophila gene ear (ENL/AF9-related), which is closely related to mammalian genes that have been implicated in the onset of acute lymphoblastic and myelogenous leukemias when their products are fused as chimeras with those of human HRX, a homolog of Drosophila trithorax. The ear gene product is present in all early embryonic cells, but becomes restricted to specific tissues in late embryogenesis. We mapped the ear gene to cytological region 88E11-13, near easter, and showed that it is deleted by Df(3R)ea5022rx1, a small, cytologically invisible deletion. Annotation of the completed Drosophila genome sequence suggests that this region might contain as many as 26 genes, most of which, including ear, are not represented by mutant alleles. We carried out a large-scale noncom-plementation screen using Df(3R)ea5022rx1 and chemical (EMS) mutagenesis from which we identified sevenc novel multi-allele recessive lethal complementation groups in this region. An overlapping deficiency, Df(3R)Po4, allowed us to map several of these groups to either the proximal or the distal regions of Df(3R)ea5022rx1. One of these complementation groups likely corresponds to the ear gene as judged by map location, terminal phenotype, and reduction of EAR protein levels.


2020 ◽  
Vol 15 (2) ◽  
pp. 1710053
Author(s):  
Zhongbang Song ◽  
Xueyi Sui ◽  
Meiyun Li ◽  
Yulong Gao ◽  
Wenzheng Li ◽  
...  
Keyword(s):  

2011 ◽  
Vol 9 (2) ◽  
pp. 174-176 ◽  
Author(s):  
O. Calderini ◽  
M. Carelli ◽  
F. Panara ◽  
E. Biazzi ◽  
C. Scotti ◽  
...  

We have established mutant collections of the model species Medicago truncatula according to current protocols. In particular, we used a transposon (Tnt1) tagging method and an ethyl methanesulfonate (EMS) mutagenesis approach (TILLING). The collections were subjected to both forward and reverse genetics screenings, and several mutants were isolated that affect plant traits (e.g. shoot, root developments, flower morphology, etc.) and also biosynthetic pathways of secondary compounds (saponins and tannins). Genes responsible for some of the mutations were cloned and further characterized.


Genetics ◽  
1988 ◽  
Vol 119 (2) ◽  
pp. 345-353
Author(s):  
D V Clark ◽  
T M Rogalski ◽  
L M Donati ◽  
D L Baillie

Abstract The organization of essential genes in the unc-22 region, defined by the deficiency sDf2 on linkage group IV, has been studied. Using the balancer nT1 (IV;V), which suppresses recombination over 49 map units, 294 lethal mutations on LGIV(right) and LGV(left) were recovered using EMS mutagenesis. Twenty-six of these mutations fell into the unc-22 region. Together with previously isolated lethal mutations, there is now a total of 63 lethal mutations which fall into 31 complementation groups. Mutations were positioned on the map using eight overlapping deficiencies in addition to sDf2. The lethal alleles and deficiencies in the unc-22 region were characterized with respect to their terminal phenotypes. Mapping of these lethal mutations shows that sDf2 deletes a minimum of 1.8 map units and a maximum of 2.5 map units. A minimum estimate of essential gene number for the region using a truncated Poisson calculation is 48. The data indicate a minimum estimate of approximately 3500 essential genes in the Caenorhabditis elegans genome.


Our Nature ◽  
2013 ◽  
Vol 10 (1) ◽  
pp. 156-166
Author(s):  
Pawan Raj Shakya ◽  
Neena Khwaounjoo

These days, unicellular green microalgae have been widely used for removal of toxic heavy metals from contaminated soil and water bodies. In the present investigation, a lead resistant PbR-11 strain isolated from Chlorella sp. by EMS mutagenesis was compared against the wild type (WT) of the same species for Pb2+ accumulating capacity. Growth of both the tested algal cells, PbR-11 and WT (control) were found to be retarded with increasing Pb2+ concentrations in the medium. However, higher ID50 value of the PbR-11 exhibited some degree of resistance to the metal toxicity. When exposed to the liquid medium containing 50 mM Pb2+, kinetic experiments showed rapid removal and adsorption of the metal ions in both the algal cells during the first few hours. Compared to WT, the PbR-11 showed significantly higher percentage removal and adsorption of Pb2+ at 15 minutes and 48 hours interval of time respectively. Extracellular Pb2+ adsorption was found significantly higher than intracellular uptake in the tested algal cells although both the processes occurred simultaneously. Total Pb2+accumulation and distribution between the external and internal cell fractions of the PbR-11 were significantly higher to that of the WT. Thus, the strain appeared more useful for remediation of contaminated sites.DOI: http://dx.doi.org/10.3126/on.v10i1.7778


2007 ◽  
Vol 24 (1) ◽  
pp. 33-38 ◽  
Author(s):  
Shin Watanabe ◽  
Tsuyoshi Mizoguchi ◽  
Koh Aoki ◽  
Yasutaka Kubo ◽  
Hitoshi Mori ◽  
...  

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