scholarly journals Protein Homologous to Human CHD1, Which Interacts with Active Chromatin (HMTase) from Onion Plants

Author(s):  
DongYun Hyun ◽  
Hong-Yul Seo
Keyword(s):  
2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Eva Höllmüller ◽  
Simon Geigges ◽  
Marie L. Niedermeier ◽  
Kai-Michael Kammer ◽  
Simon M. Kienle ◽  
...  

AbstractDecoding the role of histone posttranslational modifications (PTMs) is key to understand the fundamental process of epigenetic regulation. This is well studied for PTMs of core histones but not for linker histone H1 in general and its ubiquitylation in particular due to a lack of proper tools. Here, we report on the chemical synthesis of site-specifically mono-ubiquitylated H1.2 and identify its ubiquitin-dependent interactome on a proteome-wide scale. We show that site-specific ubiquitylation of H1 at position K64 modulates interactions with deubiquitylating enzymes and the deacetylase SIRT1. Moreover, it affects H1-dependent chromatosome assembly and phase separation resulting in a more open chromatosome conformation generally associated with a transcriptionally active chromatin state. In summary, we propose that site-specific ubiquitylation plays a general regulatory role for linker histone H1.


Genomics Data ◽  
2014 ◽  
Vol 2 ◽  
pp. 230-236 ◽  
Author(s):  
Mafalda Galhardo ◽  
Lasse Sinkkonen ◽  
Philipp Berninger ◽  
Jake Lin ◽  
Thomas Sauter ◽  
...  

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Giulia Della Chiara ◽  
Federica Gervasoni ◽  
Michaela Fakiola ◽  
Chiara Godano ◽  
Claudia D’Oria ◽  
...  

AbstractCancer is characterized by pervasive epigenetic alterations with enhancer dysfunction orchestrating the aberrant cancer transcriptional programs and transcriptional dependencies. Here, we epigenetically characterize human colorectal cancer (CRC) using de novo chromatin state discovery on a library of different patient-derived organoids. By exploring this resource, we unveil a tumor-specific deregulated enhancerome that is cancer cell-intrinsic and independent of interpatient heterogeneity. We show that the transcriptional coactivators YAP/TAZ act as key regulators of the conserved CRC gained enhancers. The same YAP/TAZ-bound enhancers display active chromatin profiles across diverse human tumors, highlighting a pan-cancer epigenetic rewiring which at single-cell level distinguishes malignant from normal cell populations. YAP/TAZ inhibition in established tumor organoids causes extensive cell death unveiling their essential role in tumor maintenance. This work indicates a common layer of YAP/TAZ-fueled enhancer reprogramming that is key for the cancer cell state and can be exploited for the development of improved therapeutic avenues.


1983 ◽  
Vol 9 (1-2) ◽  
pp. 9-17 ◽  
Author(s):  
R. Tsanev
Keyword(s):  

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