peptide orientation
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Nanoscale ◽  
2021 ◽  
Author(s):  
Nermina Brljak ◽  
Ruitao Jin ◽  
Tiffany R. Walsh ◽  
Marc R. Knecht

Modification of h-BN binding peptides can manipulate peptide orientation and overlayer viscoelasticity.


2017 ◽  
Vol 19 (32) ◽  
pp. 21340-21349 ◽  
Author(s):  
Sun Young Woo ◽  
Hwankyu Lee

Disordered and thinner bilayer w/lyso-lipids; tilted orientation of peptides in bilayer w/lyso-lipids; toroidal pores stabilized by peptides and lyso-lipids.


2015 ◽  
Vol 71 (4) ◽  
pp. 882-895 ◽  
Author(s):  
Annette E. Langkilde ◽  
Kyle L. Morris ◽  
Louise C. Serpell ◽  
Dmitri I. Svergun ◽  
Bente Vestergaard

Structural analysis of protein fibrillation is inherently challenging. Given the crucial role of fibrils in amyloid diseases, method advancement is urgently needed. A hybrid modelling approach is presented enabling detailed analysis of a highly ordered and hierarchically organized fibril of the GNNQQNY peptide fragment of a yeast prion protein. Data from small-angle X-ray solution scattering, fibre diffraction and electron microscopy are combined with existing high-resolution X-ray crystallographic structures to investigate the fibrillation process and the hierarchical fibril structure of the peptide fragment. The elongation of these fibrils proceeds without the accumulation of any detectable amount of intermediate oligomeric species, as is otherwise reported for, for example, glucagon, insulin and α-synuclein. Ribbons constituted of linearly arranged protofilaments are formed. An additional hierarchical layer is generatedviathe pairing of ribbons during fibril maturation. Based on the complementary data, a quasi-atomic resolution model of the protofilament peptide arrangement is suggested. The peptide structure appears in a β-sheet arrangement reminiscent of the β-zipper structures evident from high-resolution crystal structures, with specific differences in the relative peptide orientation. The complexity of protein fibrillation and structure emphasizes the need to use multiple complementary methods.


2013 ◽  
Vol 166 ◽  
pp. 349 ◽  
Author(s):  
Frank Versluis ◽  
Juan Dominguez ◽  
Jens Voskuhl ◽  
Alexander Kros

2011 ◽  
Vol 101 (12) ◽  
pp. 2939-2947 ◽  
Author(s):  
Vitaly V. Vostrikov ◽  
Christopher V. Grant ◽  
Stanley J. Opella ◽  
Roger E. Koeppe

2010 ◽  
Vol 82 (12) ◽  
pp. 5253-5259 ◽  
Author(s):  
Andrew J. Alpert ◽  
Konstantinos Petritis ◽  
Lars Kangas ◽  
Richard D. Smith ◽  
Karl Mechtler ◽  
...  

2010 ◽  
Vol 12 (34) ◽  
pp. 9996 ◽  
Author(s):  
Bushra R. Chaudhry ◽  
James D. E. T. Wilton-Ely ◽  
Alethea B. Tabor ◽  
Daren J. Caruana

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