drug metabolites
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2021 ◽  
pp. ASN.2021010063
Author(s):  
Fruzsina Kotsis ◽  
Ulla Schultheiss ◽  
Matthias Wuttke ◽  
Pascal Schlosser ◽  
Johanna Mielke ◽  
...  

Background Polypharamacy is common among patients with chronic kidney disease (CKD), but little is known about urinary excretion of many drugs and their metabolites among CKD patients. Methods To evaluate self-reported medication use in relation to urine drug metabolite levels in a large cohort of CKD patients, the Germany Chronic Kidney Disease study, we ascertained self-reported use of 158 substances and 41 medication groups and coded active ingredients according to the Anatomical Therapeutic Chemical classification system. We used a nontargeted mass spectrometry-based approach to quantify metabolites in urine; calculated specificity, sensitivity, and accuracy of medication use and corresponding metabolite measurements; and used multivariable regression models to evaluate associations and prescription patterns. Results Among 4885 participants, there were 108 medication-drug metabolite pairs based on reported medication use and 78 drug metabolites. Accuracy was excellent for measurements of 36 individual substances in which the unchanged drug was measured in urine (median, 98.5%; range 61.1%-100%). For 66 pairs of substances and their related drug metabolites, median measurement-based specificity and sensitivity were 99.2% (range 84.0%-100%) and 71.7% (range 1.2%-100%), respectively. Commonly prescribed medications for hypertension and cardiovascular risk reduction—including angiotensin-II receptor blockers, calcium channel blockers, and metoprolol—showed high sensitivity and specificity. Although self-reported use of prescribed analgesics (acetaminophen, ibuprofen) was <3% each, drug metabolite levels indicated higher usage (acetaminophen, 10%-26%; ibuprofen, 10%-18%). Conclusions This comprehensive screen of associations between urine drug metabolite levels and self-reported medication use supports the use of pharmacometabolomics to assess medication adherence and prescription patterns in persons with CKD, and indicates underreported use of medications available over the counter, such as analgesics.


2021 ◽  
Vol 12 ◽  
Author(s):  
Constantin Mircioiu ◽  
Valentina Anuta ◽  
Momir Mikov ◽  
Adrian Nicolescu ◽  
Victor A. Voicu

2021 ◽  
Author(s):  
Dylan H. Ross ◽  
Ryan P. Seguin ◽  
Allison M. Krinsky ◽  
Libin Xu

Drug metabolite identification is a bottleneck of drug metabolism studies. Ion mobility-mass spectrometry (IM-MS) enables the measurement of collision cross section (CCS), a unique physical property related to an ion's gas-phase size and shape, which can be used to increase the confidence in the identification of unknowns. A current limitation to the application of IM-MS to the identification of drug metabolites is the lack of reference CCS values. In this work, we present the production of a large-scale database of drug and drug metabolite CCS values, assembled using high-throughput in vitro drug metabolite generation and a rapid IM-MS analysis with automated data processing. Subsequently, we used this database to train a machine learning-based CCS prediction model, employing a combination of conventional 2D molecular descriptors and novel 3D descriptors. This novel prediction model enables the prediction of different CCS values for different protomers, conformers, and positional isomers for the first time.


2021 ◽  
Vol 36 (Supplement_1) ◽  
Author(s):  
Fruzsina Kinga Kotsis ◽  
Ulla T Schultheiß ◽  
Matthias Wuttke ◽  
Pascal Schlosser ◽  
Peter Oefner ◽  
...  

Abstract Background and Aims Chronic kidney disease (CKD) patients are prone to prescription of multiple medications. Medication adherence is a well-recognized problem in the management of patients with chronic diseases requiring polypharmacy. This study aimed to evaluate the connection between self-reported medication use and urine drug metabolite levels in a large cohort of CKD patients, the GCKD study, as a basis for future pharmacometabolomics studies. Method Self-reported medication use of 160 substances and 41 medication groups was ascertained at study baseline and coded according to the Anatomical Therapeutic Chemical classification system. A non-targeted mass spectrometry-based approach (Metabolon HD4™) was used for concomitant metabolite quantification in urine. Specificity, sensitivity and accuracy of medication use and the corresponding urine metabolite measurements were calculated. Multivariable regression models (adjusted to age, sex, eGFR, log(UACR), systolic blood pressure, LDL, log(triglycerides), log(HBA1c) were used to establish associations in prescription patterns. Results Among 4,885 participants, 78 drug metabolites were detected in urine (frequency range: 0.4-58%) and assigned into 110 medication – drug metabolite pairs (MMPs) based on reported individual substances and medication groups. For all 68 MMPs of individual substances, accuracy of medication use and the corresponding drug metabolite measurement was excellent (median 97.0%, range 43%-100%), as was measurement-based specificity (median 99.3%, range 73.3%-100%; Fig. 1). Median measurement-based sensitivity was 72.1% (range 1.1%-100%, Fig. 1). Sensitivity and specificity were especially high for angiotensin-II receptor blockers (92%-96%; 99-100%), calcium channel blockers (85-100%; 91-100%), and metoprolol (90%; 98% respectively) commonly prescribed and important medications for blood pressure control and cardiovascular risk reduction in CKD patients. MMPs showing sensitivity &lt;80% included several substances found in over-the-counter (OTC) analgesic medications, suggesting that their use is not always reported. While self-reported use of the OTC analgesics acetaminophen and ibuprofen was &lt;3% each, their corresponding drug metabolites indicated higher usage (acetaminophen: 10-26%; ibuprofen: 10-18%, depending on the number of evaluated drug metabolites). Typical examples of medication co-prescriptions (e.g., trimethoprim and sulfamethoxazole) were detected as the combined presence of their drug metabolites in urine. This result validates the abstraction of single substances from combination medications and this urine-based metabolomic approach. Conclusion This study provides a comprehensive screen of the associations between urine drug metabolite levels and self-reported medication use. It supports the usefulness of pharmacometabolomics to assess medication use, frequency of OTC analgesics use, and prescription patterns in persons with CKD.


2021 ◽  
Vol 17 (1) ◽  
Author(s):  
Arun Dhir ◽  
Hasandeep Kular ◽  
Abdelbaset A. Elzagallaai ◽  
Bruce Carleton ◽  
Michael J. Rieder ◽  
...  

Abstract Background Drug reaction with eosinophilia and systemic symptoms (DRESS) is a rare but serious delayed hypersensitivity reaction that can be caused by antibiotic exposure. The reaction typically develops in 2 to 6 weeks. The pathophysiology is thought to involve toxic drug metabolites acting as a hapten, triggering a systemic response. The diagnosis is made clinically but can be confirmed using assays such as the lymphocyte toxicity assay (LTA), which correlates cell death upon exposure to drug metabolites with susceptibility to hypersensitivity reactions. Case presentations Case 1 involves a previously healthy 11-month-old male with first exposure to amoxicillin-clavulanate, prescribed for seven days to treat a respiratory infection. The patient developed DRESS fourteen days after starting the drug and was successfully treated with corticosteroids. LTA testing confirmed patient susceptibility to hypersensitivity reactions with amoxicillin-clavulanate. Parental samples were also tested, showing both maternal and paternal susceptibility. Neither parent reported prior hypersensitivity reactions. Lifelong penicillin avoidance for the patient was advised along with the notation in medical records of penicillin allergy. The parents were advised to avoid penicillin class antibiotics and be monitored closely for DRESS if they are exposed. Case 2 involves an 11-year-old female with atopic dermatitis with first exposure to amoxicillin-clavulanate, prescribed for ten days to treat a secondary bacterial skin infection. She developed DRESS eleven days after starting antibiotics and was successfully treated with corticosteroids. LTA testing confirmed patient susceptibility to hypersensitivity reactions with amoxicillin-clavulanate. Maternal samples were also tested and showed sensitivity. The mother reported no prior hypersensitivity reactions. Lifelong penicillin avoidance for the patient was advised along with the notation in medical records of penicillin allergy. Conclusions Amoxicillin-clavulanate is a commonly used antibiotic and the cases we have described suggest that it should be recognized as a potential cause of DRESS in pediatric patients. Furthermore, these cases contribute to current literature supporting that there may be a shorter latent period in DRESS induced by antibiotics. We have also shown that the LTA can be a helpful tool to confirm DRESS reactions, and that testing may have potential implications for family members.


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