illumina technology
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2021 ◽  
Vol 10 (38) ◽  
Author(s):  
Cyril Conde ◽  
Maxime Branger ◽  
Thierry Cochard ◽  
Marie-Noëlle Rossignol ◽  
Christine Fourichon ◽  
...  

Mycobacterium avium subsp. paratuberculosis is the etiological agent of Johne’s disease in ruminants. Here, we report the annotated draft genome sequences of 142 M. avium subsp. paratuberculosis strains that were isolated from dairy cattle in France between 2014 and 2018. The genomes of these strains were sequenced using Illumina technology.


2020 ◽  
Vol 9 (38) ◽  
Author(s):  
Sergey V. Tarlachkov ◽  
Irina P. Starodumova ◽  
Lubov V. Dorofeeva ◽  
Natalia V. Prisyazhnaya ◽  
Semen A. Leyn ◽  
...  

ABSTRACT Draft genome sequences of 13 bacterial strains from the family Microbacteriaceae were generated using Illumina technology. The genome sizes varied from 3.0 to 4.8 Mb, and the DNA G+C content was 68.1 to 72.5%. The sequences obtained will contribute to the development of genome-based taxonomy and understanding of molecular interactions between bacteria and plants.


2020 ◽  
Vol 9 (16) ◽  
Author(s):  
Geert Cremers ◽  
Arjan Pol ◽  
Mike S. M. Jetten ◽  
Huub J. M. Op den Camp

Methylacidimicrobium cyclopophantes 3B and Methylacidimicrobium tartarophylax 4AC are Gram-negative rod-shaped mesophilic methanotrophs isolated from soil samples with low pH at the Solfatara Crater, near Naples, Italy. The genomes of these extremophilic verrucomicrobia were sequenced using Illumina technology, and both species possess one pmoCAB operon and two xoxF genes.


2019 ◽  
Vol 8 (4) ◽  
Author(s):  
Mercedes Sánchez ◽  
Alba Blesa ◽  
Eva Sacristán-Horcajada ◽  
José Berenguer

Mycolicibacterium hassiacum is the most thermophilic of all the mycobacteria. A partial sequence based on Illumina technology of around 5 Mbp was published in 2012.


2018 ◽  
Vol 7 (11) ◽  
Author(s):  
Oleg V. Vasilenko ◽  
Irina P. Starodumova ◽  
Lubov V. Dorofeeva ◽  
Sergey V. Tarlachkov ◽  
Natalia V. Prisyazhnaya ◽  
...  

Draft genome sequences of 11 bacteria belonging to the family Microbacteriaceae were obtained using Illumina technology. The genomes of these strains have sizes from 3.14 to 4.30 Mb with their genomic DNA characterized as having high G+C contents (above 65%).


2018 ◽  
Vol 7 (8) ◽  
Author(s):  
Donald M. Gardiner

Fusarium verticillioides is an important pathogen of maize worldwide. Here, three Australian isolates of F. verticillioides, originally obtained from maize or sorghum, were sequenced using Illumina technology to expand the available genomic resources for this important pathogen.


Author(s):  
Peter Robinson ◽  
Jochen Hecht
Keyword(s):  

Author(s):  
Victoria Y. Shtratnikova ◽  
Mikhail I. Schelkunov ◽  
Marina V. Donova

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Ana C. Lauer ◽  
Ben W. Humrighouse ◽  
Vladimir Loparev ◽  
Patricia L. Shewmaker ◽  
Anne M. Whitney ◽  
...  

The inclusion of molecular methods in the characterization of the novel species Enterococcus horridus necessitated the sequencing and assembly of the genomes of the closely related Enterococcus rotai and Enterococcus silesiacus . Sequencing using Illumina technology in combination with optical mapping led to the generation of closed genomes for both isolates.


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