presqualene diphosphate
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Plants ◽  
2021 ◽  
Vol 10 (7) ◽  
pp. 1389
Author(s):  
Deyani Nocedo-Mena ◽  
María Yolanda Ríos ◽  
M. Ángeles Ramírez-Cisneros ◽  
Leticia González-Maya ◽  
Jessica N. Sánchez-Carranza ◽  
...  

Cissus incisa leaves have been traditionally used in Mexican traditional medicine to treat certain cancerous illness. This study explored the metabolomic profile of this species using untargeted technique. Likewise, it determined the cytotoxic activity and interpreted all data by computational tools. The metabolomic profile was developed through UHPLC-QTOF-MS/MS for dereplication purposes. MetaboAnalyst database was used in metabolic pathway analysis and the network topological analysis. Hexane, chloroform/methanol, and aqueous extracts were evaluated on HepG2, Hep3B, HeLa, PC3, A549, and MCF7 cancer cell lines and IHH immortalized hepatic cells, using Cell Titer proliferation assay kit. Hexane extract was the most active against Hep3B (IC50 = 27 ± 3 μg/mL), while CHCl3/MeOH extract was the most selective (SI = 2.77) on the same cell line. A Principal Component Analysis (PCA) showed similar profiles between the extracts, while a Venn diagram revealed 80 coincident metabolites between the bioactive extracts. The sesquiterpenoid and triterpenoid biosynthesis pathway was the most significant identified. The Network Pharmacology (NP) approach revealed several targets for presqualene diphosphate, phytol, stearic acid, δ-tocopherol, ursolic acid and γ-linolenic acid, involved in cellular processes such as apoptosis. This work highlights the integration of untargeted metabolomic profile and cytotoxic activity to explore plant extracts, and the NP approach to interpreting the experimental results.


ChemInform ◽  
2010 ◽  
Vol 26 (32) ◽  
pp. no-no
Author(s):  
D. H. ROGERS ◽  
E. C. YI ◽  
C. D. POULTER

2010 ◽  
Vol 75 (14) ◽  
pp. 4769-4777 ◽  
Author(s):  
Ali Koohang ◽  
Jessica L. Bailey ◽  
Robert M. Coates ◽  
Hans K. Erickson ◽  
David Owen ◽  
...  

ChemInform ◽  
2010 ◽  
Vol 30 (26) ◽  
pp. no-no
Author(s):  
Ali Koohang ◽  
Robert M. Coates ◽  
David Owen ◽  
C. Dale Poulter

ChemInform ◽  
2010 ◽  
Vol 31 (10) ◽  
pp. no-no
Author(s):  
Martin G. Banwell ◽  
Grant S. Forman ◽  
David C. R. Hockless

Biochemistry ◽  
2009 ◽  
Vol 48 (13) ◽  
pp. 2997-3004 ◽  
Author(s):  
Troy Carlo ◽  
Nicos A. Petasis ◽  
Bruce D. Levy

2008 ◽  
Vol 190 (11) ◽  
pp. 3808-3816 ◽  
Author(s):  
Sungwon Lee ◽  
C. Dale Poulter

ABSTRACT Squalene synthase (SQS) is a bifunctional enzyme that catalyzes the condensation of two molecules of farnesyl diphosphate (FPP) to give presqualene diphosphate (PSPP) and the subsequent rearrangement of PSPP to squalene. These reactions constitute the first pathway-specific steps in hopane biosynthesis in Bacteria and sterol biosynthesis in Eukarya. The genes encoding SQS were isolated from the hopane-producing bacteria Thermosynechococcus elongatus BP-1, Bradyrhizobium japonicum, and Zymomonas mobilis and cloned into an Escherichia coli expression system. The expressed proteins with a His6 tag were found exclusively in inclusion bodies when no additives were used in the buffer. After extensive optimization, soluble recombinant T. elongatus BP-1 SQS was obtained when cells were disrupted and purified in buffers containing glycerol. The recombinant B. japonicum and Z. mobilis SQSs could not be solubilized under any of the expression and purification conditions used. Purified T. elongatus His6-SQS gave a single band at 42 kDa by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and molecular ion at m/z 41886 by electrospray mass spectrometry. Incubation with FPP and NADPH gave squalene as the sole product. Incubation of the enzyme with [14C]FPP in the absence of NADPH gave PSPP. The enzyme requires Mg2+ for activity, has an optimum pH of 7.6, and is strongly stimulated by detergent. Under optimal conditions, the K m of FPP is 0.97 ± 0.10 μM and the k cat is 1.74 ± 0.04 s−1. Zaragozic acid A, a potent inhibitor of mammalian, fungal, and Saccharomyces cerevisiae SQSs, also inhibited recombinant T. elongatus BP-1 SQS, with a 50% inhibitory concentration of 95.5 ± 13.6 nM.


2008 ◽  
Vol 22 (S1) ◽  
Author(s):  
Troy Carlo ◽  
Kioichi Fukunaga ◽  
Bruce D. Levy

2006 ◽  
Vol 281 (14) ◽  
pp. 9490-9497 ◽  
Author(s):  
Koichi Fukunaga ◽  
Makoto Arita ◽  
Minoru Takahashi ◽  
Andrew J. Morris ◽  
Michael Pfeffer ◽  
...  

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