Suspended Particular Matter drives the spatial segregation of nitrogen turnover along the hyper-turbid Ems estuary

Estuaries are nutrient filters and change riverine nutrient loads before they reach coastal oceans. They have been extensively changed by anthropogenic activities like draining, deepening, and dredging to meet economic and social demand, causing significant regime changes like tidal amplifications and in some cases to hyper-turbid conditions. Furthermore, increased nutrient loads, especially nitrogen, mainly by agriculture cause coastal eutrophication. Estuaries can either act as a sink or as a source of nitrate, depending on environmental and geomorphological conditions. These factors vary along an estuary, and change nitrogen turnover in the system. Here, we investigate the factors controlling nitrogen turnover in the hyper-turbid Ems estuary (Northern Germany) that has been strongly impacted by human activities. During two research cruises in August 2014 and June 2020, we measured water column properties, dissolved inorganic nitrogen, dual stable isotopes of nitrate and dissolved nitrous oxide concentration along the estuary. Overall, the Ems estuary acts as a nitrate sink in both years. However, three distinct biogeochemical zones exist along the estuary. A strong fractionation (~ 26 ‰) of nitrate stable isotopes points towards nitrate removal via water column denitrification in the hyper-turbid Tidal River, driven by anoxic conditions in deeper water layers. In the Middle Reaches of the estuary nitrification gains in importance turning this section into a net nitrate source. The Outer Reaches are dominated by mixing with nitrate uptake in 2020. We find that the overarching control on biogeochemical nitrogen cycling, zonation and nitrous oxide production in the Ems estuary is exerted by suspended particulate matter concentrations and the linked oxygen deficits.

Biogeochemical zonation reveals three zones of nitrogen turnover in the Ems estuary

<p>Estuaries are nutrient filters for coastal waters and can act as nitrate sink or source depending on predominant microbial processes, environmental conditions and geomorphological characteristics. Such environmental factors can change along the estuary itself. This study aims to identify different zones of nitrogen turnover in the Ems estuary and to determine the main processes.</p><p>Water column properties, dissolved inorganic nitrogen and dual stable isotopes of nitrate were measured along the Ems estuary during two research cruises in August 2014 and June 2020. Based on mixing calculations and stable isotope changes, we found that the estuary in both years is clearly divided into three zones that vary in the predominant nitrate turnover pathways. This was confirmed by principle component analysis.</p><p>The zonation mainly corresponded to changes in the geomorphology of the estuary, but a spatial shift of the zones occurred between 2014 and 2020. In both years, the most upstream zone acted as a clear nitrate sink. A strong fractionation (~30 ‰) of nitrate stable isotopes points towards removal by water column denitrification in this hyperturbid estuarine section.  In the middle reach of the estuary, nitrification gained in importance, turning this section into a net nitrate source during both sampling campaigns. In contrast to the biogeochemical active inner zones, mixing dominates nitrate distribution in the outermost section of the estuary.</p><p>Overall, the Ems estuary acted as a nitrate sink in both years. However, the zonation showed that relative stable zones of nitrification and denitrification existed along the estuary, which can change – and possibly move – when biogeochemical properties vary. </p>