Epidemiological analysis of classical swine fever in wild boars in Japan

Background Classical swine fever (CSF) is a contagious disease of pigs and wild boars that is transmitted through direct/indirect contact between animals or CSF virus-contaminated fomites. When the disease re-emerged in 2018 in Japan, a CSF-infected wild boar was reported shortly after the initial pig farm outbreak; subsequently, the disease spread widely. To control the disease spread among wild boars, intensive capturing, fencing, and oral bait vaccination were implemented with concomitant virological and serological surveillance. This study aimed to describe the disease spread in the wild boar population in Japan from September 2018, when the first case was reported, to March 2020, based on the surveillance data. We conducted statistical analyses using a generalized linear mixed model to identify factors associated with CSF infection among wild boars. Moreover, we descriptively assessed the effect of oral bait vaccination, which started in March 2019 in some municipalities in the affected areas. Results We observed a faster CSF infection spread in the wild boar population in Japan compared with the CSF epidemics in European countries. The infection probability was significantly higher in dead and adult animals. The influence of the multiple rounds of oral bait vaccination was not elucidated by the statistical modeling analyses. There was a decrease and increase in the proportion of infected and immune animals, respectively; however, the immunization in piglets remained insufficient after vaccination for 1 year. Conclusions Conditions regarding the wild boar habitat, including forest continuity, higher wild boar population density, and a larger proportion of susceptible piglets, were addressed to increase the infection risk in the wild boar population. These findings could improve the national control strategy against the CSF epidemic among wild boars.

Crustose Calicioid Lichens and Fungi in Mountain Cloud Forests of Tanzania

A total of 26 crustose calicioid lichens and fungi were found in Tanzania. Most of them belong to a group of species with wide distributions in cool areas of both hemispheres and occasional occurrence in high mountains at low latitudes. In Tanzania calicioids mainly occur in the middle and upper forest zones and their niches are found on the bark of old trees and on lignum, most of them restricted to mountain cloud forests. Calicioids are rare and often red-listed, and are also bioindicators of long forest continuity. Consequently, they form an important biota in mountain cloud forests and deserve attention in the context of preserving biodiversity and developing conservation policies. One new species, Chaenothecopsis kilimanjaroensis, is described. Chaenotheca hispidula and Pyrgillus cambodiensis are reported as new to Africa and Calicium lenticulare and Chaenothecopsis debilis are reported as new to Tanzania.

The reconstruction of past forest dynamics over the last 13,500 years in SW Sweden

Evidence for unbroken continuity of tree taxa over the last c. 13,500 years is presented from a biodiversity ‘hotspot’ nature reserve in south-west Sweden. Forest composition, continuity, fire and disturbance events are reconstructed using palaeoecological methods. A lake record reveals that Pinus sylvestris, Betula spp., Salix spp., Populus tremula and Hippophae rhamnoides were the initial trees scattered in a semi-open, steppe environment. This developed into forest with Pinus, Betula, Corylus, Alnus, Ulmus and Populus with evidence for frequent fires. Deciduous trees became more significant as fires became less frequent and Quercus, Fraxinus and Tilia expanded. Fire frequencies increased again in the Bronze Age probably associated with anthropogenic use of the forest, and the first Fagus sylvatica pollen was recorded. Burning continued through the Iron Age, but charcoal is briefly absent for a period often referred to as the ‘Late Iron Age Lull’. The forest re-expanded with successions involving Juniperus, but with an altered composition from the earlier mixed deciduous community, to one dominated by Fagus. This is coincident with the first pollen records for Picea abies. The early Holocene mixed forest with frequent low-intensity fires is potentially associated with the greatest diversity of red-listed insect species. Forest continuity and the fragmented reservoir populations of old deciduous trees in the Fagus-dominated forest today are likely to have been critical in preserving the present-day, species-rich, rare epiphytic flora, wood-inhabiting fungi and invertebrate communities. As many of these forest fragments may become more vulnerable with future climate change, tree diversity with some disturbance may become essential for survival of the endangered saproxylic species.

Changes in bryophytes assemblages along a chronosequence in eastern boreal forest of Quebec

Old-growth forests are often considered as biodiversity hotspots for bryophytes because of their diversity in environmental niches or microhabitats and forest continuity. Following this hypothesis, old-growth forests would be expected to house species and functional traits associated with species dispersal different from mature forests. In this study, we compared bryophytes in old-growth and younger forests in terms of species composition, functional trait values, and microhabitat associations. We studied bryophytes in 22 sites distributed across three age classes (18 to >200 years) in boreal forests (eastern Quebec). Richness of liverworts, vegetative-reproducing species, and species with infrequent sexual reproduction were higher in the oldest age class. Species richness was best explained by the availability of coarse woody material (CWM) and other microhabitats, and community structure was best explained by balsam fir basal area. Microhabitats most often associated with indicator species were organic matter, CWM, and pits. Our results indicate that communities associated with older forests are potentially sensitive to forest management as they differ in composition and functional traits from other age classes, with many species characterized by reduced dispersal capabilities and tolerance to competition. An approach that combines critical source habitat protection for dispersal-limited species with protection of critical microhabitats in neighboring managed stands are necessary to allow successful recolonization and maintain bryophyte diversity in managed landscapes.