DNA metabarcoding provides insights into the diverse diet of a dominant suspension feeder, the giant plumose anemone Metridium farcimen

ABSTRACTBenthic suspension feeders have significant impacts on plankton communities by depleting plankton or modifying composition of the plankton through prey selectivity. Quantifying diets of planktivorous animals can be difficult because plankton are frequently microscopic, may lack diagnostic characters, and are digested at variable rates. With DNA metabarcoding, the identification of gut contents has become faster and more accurate, and the technique allows for higher taxonomic resolution-n while also identifying rare and highly degraded items that would otherwise not be detected. We used DNA metabarcoding to examine the diet of the giant plumose anemone Metridium farcimen, a large, abundant, competitively-dominant anemone on subtidal rock surfaces and floating docks in the northeast Pacific Ocean. Gut contents of 12 individuals were compared to 80- and 330-μm filtered plankton samples collected one hour prior between 0.02 and 1.5 km from the anemones. The objectives of this study were to determine if M. farcimen has a selective diet and compare our findings with traditional gut content analyses. Metridium farcimen captured a wider range of prey than previously suspected and metabarcoding found many more taxa than traditional sampling techniques. Gut contents were less diverse than 80-μm filtered plankton samples, but more diverse than 330-μm filtered plankton samples. The diet of the anemones was 52% arthropods with a surprisingly high relative abundance of an ant (10%) that has mating flights in August when this study was conducted. The gut contents of M. farcimen likely include all prey that it can detect and that cannot escape. There were no overrepresented taxa in the gut contents compared to the plankton but there were underrepresented taxa. This study highlights the usefulness of the metabarcoding method in identifying prey within the gut of planktivorous animals and the significant terrestrial input into marine food webs.

Genome assembly and annotation of the California harvester ant Pogonomyrmex californicus

The harvester ant genus Pogonomyrmex is endemic to arid and semiarid habitats and deserts of North and South America. The California harvester ant Pogonomyrmex californicus is the most widely distributed Pogonomyrmex species in North America. Pogonomyrmex californicus colonies are usually monogynous, i.e. a colony has one queen. However, in a few populations in California, primary polygyny evolved, i.e. several queens cooperate in colony founding after their mating flights and continue to coexist in mature colonies. Here, we present a genome assembly and annotation of P. californicus. The size of the assembly is 241 Mb, which is in agreement with the previously estimated genome size. We were able to annotate 17,889 genes in total, including 15,688 protein-coding ones with BUSCO (Benchmarking Universal Single-Copy Orthologs) completeness at a 95% level. The presented P. californicus genome assembly will pave the way for investigations of the genomic underpinnings of social polymorphism in the number of queens, regulation of aggression, and the evolution of adaptations to dry habitats.

High-Quality Genome Assembly and Annotation of the California Harvester Ant Pogonomyrmex californicus (Buckley, 1867)

ABSTRACTThe harvester ant genus Pogonomyrmex is endemic to arid and semiarid habitats and deserts of North and South America and California harvester ant Pogonomyrmex californicus is the most widely distributed Pogonomyrmex species in the North America. P. californicus colonies are usually monogynous, i.e. a colony has one queen. However, in a few populations in California, primary polygyny evolved, i.e. several queens cooperate in colony founding after their mating flights and continue to coexist in mature colonies. Here, we present high quality genome assembly and annotation of P. californicus. The size of the assembly is 241 Mb, which is in good agreement with previously estimated genome size and we were able to annotate 17,889 genes in total, including 15,688 protein-coding ones with BUSCO completeness at the 95% level. This high quality genome will pave the way for investigations of the genomic underpinnings of social polymorphism in queen number, regulation of aggression, and the evolution of adaptations to dry habitats in P. californicus.

Penjadwalan Kompetisi Sepak Bola Liga PSN Ngada Menggunakan Algoritma Honey Bee Mating Optimization

Soccer scheduling is one of the key factors so that the competition can be done well or not. Poor scheduling will affect the condition of the team that will compete, because a poor schedule will prevent the team from preparing their team well for the next match. For this research, we will discuss a system that can determine scheduling and also discuss issues that must be resolved in the big phase 10 PSN Ngada competition that uses a competition system. In this study, we will use the marriage honey bee optimization algorithm, this algorithm was chosen because it is easy to use and can produce quite good scheduling. This algorithm allows the formation of scheduling that avoids predetermined boundaries of combinations that have been formed, which have passed the process of mating flights, crossover, mutations and queen selection. This cycle will continue to run until it reaches the specified and choose scheduling with the best fitness value.

Seminal fluid compromises visual perception in honeybee queens reducing their survival during additional mating flights

Queens of social insects make all mate-choice decisions on a single day, except in honeybees whose queens can conduct mating flights for several days even when already inseminated by a number of drones. Honeybees therefore appear to have a unique, evolutionarily derived form of sexual conflict: a queen’s decision to pursue risky additional mating flights is driven by later-life fitness gains from genetically more diverse worker-offspring but reduces paternity shares of the drones she already mated with. We used artificial insemination, RNA-sequencing and electroretinography to show that seminal fluid induces a decline in queen vision by perturbing the phototransduction pathway within 24–48 hr. Follow up field trials revealed that queens receiving seminal fluid flew two days earlier than sister queens inseminated with saline, and failed more often to return. These findings are consistent with seminal fluid components manipulating queen eyesight to reduce queen promiscuity across mating flights.

Balling Behavior of Workers Toward Honey Bee Queens Returning from Mating Flights

During natural mating honeybee queens can get lost due to drifting, predators or other cases. In this work, the balling of queens returning from flights by worker bees originating from the same colony was observed. Three subspecies of bees Carniolan, Caucasian and European Black Bee were tested. Research was conducted in both spring and summer, but in the former in newly created colonies, while in the latter in new and earlier used ones. Generally 15.2% of queens were balled and in total 30.2% of queens were lost during mating flights. 269 queens performed 785 mating flights, and 5.2% of those finished with balling. Three times more queens were balled when returning from mating flight rather than orientation flight. Subspecies matches or mismatches of queens and workers in nucleuses did not significantly affect the balling or its frequency. Additionally, no bee subspecies characterized stronger tendencies to ball a queen. Worker bees from newly created nucleuses treated queens similarly to the ones in nucleuses earlier used. However, significantly more queens had been balled during the spring in comparison to summer. There were days with higher balling of queens. During some days the weather was very unstable and unpredictable with such anomalies as heat waves, thunderstorms or sudden drops in insolation. Most of the queens were balled at the entrance while returning from flight and only a few inside the hive. In the research, clear causes of balling were not found, but some factors can be excluded.