scholarly journals Mutations affecting the internal equilibrium of the reaction catalyzed by 6-aminohexanoate-dimer hydrolase

FEBS Letters ◽  
2016 ◽  
Vol 590 (18) ◽  
pp. 3133-3143 ◽  
Author(s):  
Seiji Negoro ◽  
Yasuyuki Kawashima ◽  
Naoki Shibata ◽  
Tatsuya Kobayashi ◽  
Takeshi Baba ◽  
...  
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1981 ◽  
Vol 10 (1) ◽  
pp. 39-43 ◽  
Author(s):  
M Nissan

The internal equilibrium of human joints has been dealt with by many investigators, either as a means for better understanding and treating joint diseases or as a basis for prosthetic design. In all cases there is less information than needed for an accurate solution, and the investigators have to use simplifying geometry and restricting assumptions. In this work a permutation method was used, which takes advantage of big computer facilities in order to reduce the number of assumptions needed. The method was used for the case of the knee joint. The results were compared to those available using a regular method, showing the permutation one to be superior.


Biochemistry ◽  
1995 ◽  
Vol 34 (5) ◽  
pp. 1744-1749 ◽  
Author(s):  
Klemens J. Hertel ◽  
Olke C. Uhlenbeck

2010 ◽  
Vol 75 (2) ◽  
pp. 185-194 ◽  
Author(s):  
Vladimir Leskovac ◽  
Svetlana Trivic ◽  
Draginja Pericin ◽  
Mira Popovic ◽  
Julijan Kandrac

In this work, the binding of coenzymes to yeast alcohol dehydrogenase (EC 1.1.1.1) were investigated. The main criterions were the change in the standard free energies for individual reaction steps, the internal equilibrium constants and the overall changes in the reaction free energies. The calculations were performed for the wild type enzyme at pH 6-9 and for 15 different mutant type enzymes, with single or double point mutations, at pH 7.3. The abundance of theoretical and experimental data enabled the binding of coenzymes to enzyme to be assessed in depth.


In his classical treatment of the thermodynamics of capillarity* Gibbs considered the equilibrium of the matter contained within a closed surface (A, fig. 1), drawn so as to cut the dividing surface (S) between the two phases normally everywhere and to include part of the homogeneous mass on each side. The matter contained within this surface is divided into three parts by two surfaces (B, B), one on each side of S and very near to that surface, although at such a distance as to lie entirely beyond the influence of the discontinuity in its vicinity. If ε, ε', ε'' and η , η' , η" are the value of the energy and entropy of the part between the surfaces BB, and of the homogeneous parts outside these surfaces respectively, the condition of internal equilibrium of the whole mass is dε + dε' + dε" ≧ 0, (1) for all possible variations for which the total entropy remains constant, i. e ., for which dη + dη' + dη'' = 0. (2)


1979 ◽  
Vol 33 (1) ◽  
pp. 81-88
Author(s):  
Montgomery Slatkin

SUMMARYA method is introduced that allows the simplification of the calculation of equilibrium solutions in multiple locus genetic models of a single infinite population. The method can be applied when the number of different fitnesses is equal to or less than one more than the number of independent allelic frequencies. The results are in terms of relationships – the symmetry constraints – between the gametic frequencies that must be satisfied at any boundary or internal equilibrium. The symmetry constraints are independent of the fitness values and of the recombination fractions. This can lead to some understanding of the equilibrium structure of a model when the full equilibrium solution is not obtained and reduces the number of independent variables in the calculations of the full equilibrium solutions. Examples of two locus models with two alleles at each locus and with two alleles at one locus and three at the other are discussed.


One of the fundamental problems in the field of colloids is the investigation of their structure. This is a subject of considerable importance and has been attracting a great deal of attention from workers in this field. A systematic study of the various physical properties of colloids is essential for a clear understanding of the nature of the colloidal state. The optical properties are of special importance as they have the great advantage of revealing the structure of colloidal systems without disturbing their internal equilibrium. They furnish direct information concerning the size and the shape of the colloidal particles. In a series of papers, of which this is the first, the author proposes to publish investigations on the scattering of light in colloidal solutions and gels. An attempt will be made to discuss the various problems concerning their structure, as revealed by the study of the Tyndall effect in such systems.


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