An enzyme kinetic model for describing fermentation processes

1970 ◽  
Vol 12 (5) ◽  
pp. 831-843 ◽  
Author(s):  
Robert D. Tanner
2018 ◽  
Vol 2 (4) ◽  
pp. 57 ◽  
Author(s):  
Lidia Pino ◽  
Vincenzo Recupero ◽  
Agustín Hernández

In the present study, the ANEMONA.XLT tool, an Excel template that was designed for calculation of enzyme kinetic parameters, has been successful adapted to some proposed models for dry reforming reaction, such as Eley-Rideal or Langmuir-Hinshelwood kinetic models. Model discrimination by non-linear regression analysis has been applied to data from the literature; the predicted kinetic parameters that were obtained using ANEMONA.XLT were fully comparable with those already published. Thus, the template can be a helpful and user-friendly alternative tool for researchers who do not have advanced skills in computer programming.


2003 ◽  
Vol 83 (7) ◽  
pp. 790-797 ◽  
Author(s):  
Sridhar Viamajala ◽  
Brent M. Peyton ◽  
James N. Petersen

Circulation ◽  
2014 ◽  
Vol 130 (suppl_2) ◽  
Author(s):  
Saghar Bagheri ◽  
Dieter Hafner ◽  
Thomas Hohlfeld

Introduction: Non-aspirin NSAIDs attenuate the antiplatelet action of aspirin leading to High on Aspirin Platelet Reactivity (HAPR). However, detailed features of this interaction are still unresolved. Both competitive as well as non-competitive interaction at the cyclooxygenase-1 (COX-1) enzyme have been proposed. Hypothesis: We examined whether competitive enzyme kinetics describe COX-1 inhibition by aspirin and HAPR and if they are compatible with results obtained experimentally. Methods: We have developed an enzyme kinetic model of the aspirin/NSAID interaction at COX-1 using mathematical modelling and have varied enzyme kinetic parameters to predict the occurrence and the extent of HAPR. Subsequently, the predictions obtained were experimentally verified with selected NSAIDs using light transmission aggregometry and immunoassay for platelet thromboxane (TX) synthesis. Results: Enzyme kinetic modelling predicted that only low- and medium-affinity NSAIDs (Ki ≥1 μM), but not high-affinity NSAIDs, interfere with COX-1 inhibition by aspirin. Furthermore, the interaction was predicted to be most extensive at high concentrations of arachidonic acid (1mM). Experimental results confirmed the model by showing that low or medium-affinity COX-1 inhibitors piroxicam, dipyrone and celecoxib (each n=5-10) largely prevented the inhibition of aggregation and platelet TX synthesis in vitro by 30 μmol/L aspirin whereas the high-affinity COX-1 inhibitor SC560 (n=6) did not interfere with aspirin at all. In accordance to the mathematical model, aspirin/NSAID interaction was more pronounced in presence of high (1mmol/L) versus low (0.3mmol/L) concentration of arachidonic acid. Hence, the kinetic model was validated experimentally. Conclusion: Both enzyme kinetic modelling and experimental results suggest competitive antagonism of NSAID and aspirin at COX-1 as a cause for HAPR, possibly resulting in cardiovascular events. Critical parameters that influence this interaction are drug concentrations and NSAID affinity. Interestingly, the concentration of arachidonic acid also influences the NSAID/aspirin interaction, suggesting that “fatty acid tone” and lipid metabolism may influence this unfavourable drug/drug interaction.


1989 ◽  
Vol 44 (5-6) ◽  
pp. 473-479 ◽  
Author(s):  
Georg Heinen ◽  
Heinrich Strotmann

Abstract Rates of photophosphorylation were measured at constant saturating phosphate concentration , varying ADP concentration , and varying light intensity. As the transmembrane proton gradient is decreased by phosphorylation to different extents depending on the concentration of ADP . rates of ATP formation obtained at the different ADP concentrations were plotted versus the actual steady state ΔpH (in the absence of ΔΨ) during the course of the reaction . ΔpH was monitored by the calibrated 9-aminoacridine fluorescence technique. In secondary plots phosphorylation as function of ADP concentration at different constant ΔpH values were obtained . The results indicate Michaelis-Menten kinetics. The true Km for ADP is virtually unaffected by ΔpH whereas Vmax (at ADP saturation ) strongly depends on ΔpH . The results are discussed in the framework of a simple enzyme kinetic model which considers the intrathylakoidal proton (at constant external pH ) as a third substrate for ATP formation. The model is capable o f explaining the reported results as well as a variety of important results from the literature.


1989 ◽  
Vol 8 (1) ◽  
pp. 37-45 ◽  
Author(s):  
S. Damjanovich ◽  
I. Zs.-Nagy ◽  
B. Somogyi
Keyword(s):  

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