scholarly journals Machine learning‐based classification of diffuse large B‐cell lymphoma patients by eight gene expression profiles

2016 ◽  
Vol 5 (5) ◽  
pp. 837-852 ◽  
Author(s):  
Shuangtao Zhao ◽  
Xiaoli Dong ◽  
Wenzhi Shen ◽  
Zhen Ye ◽  
Rong Xiang
Oncology ◽  
2008 ◽  
Vol 75 (1-2) ◽  
pp. 71-80 ◽  
Author(s):  
Zeenath Jehan ◽  
Abdul K. Siraj ◽  
Jehad Abubaker ◽  
Christian Ruiz ◽  
Ronald Simon ◽  
...  

2015 ◽  
Vol 14 (11) ◽  
pp. 2947-2960 ◽  
Author(s):  
Sally J. Deeb ◽  
Stefka Tyanova ◽  
Michael Hummel ◽  
Marc Schmidt-Supprian ◽  
Juergen Cox ◽  
...  

Blood ◽  
2005 ◽  
Vol 105 (9) ◽  
pp. 3671-3678 ◽  
Author(s):  
Juliette J. Hoefnagel ◽  
Remco Dijkman ◽  
Katia Basso ◽  
Patty M. Jansen ◽  
Christian Hallermann ◽  
...  

AbstractIn the European Organization for Research and Treatment of Cancer (EORTC) classification 2 types of primary cutaneous large B-cell lymphoma (PCLBCL) are distinguished: primary cutaneous follicle center cell lymphomas (PCFCCL) and PCLBCL of the leg (PCLBCL-leg). Distinction between both groups is considered important because of differences in prognosis (5-year survival > 95% and 52%, respectively) and the first choice of treatment (radiotherapy or systemic chemotherapy, respectively), but is not generally accepted. To establish a molecular basis for this subdivision in the EORTC classification, we investigated the gene expression profiles of 21 PCLBCLs by oligonucleotide microarray analysis. Hierarchical clustering based on a B-cell signature (7450 genes) classified PCLBCL into 2 distinct subgroups consisting of, respectively, 8 PCFCCLs and 13 PCLBCLsleg. PCLBCLs-leg showed increased expression of genes associated with cell proliferation; the proto-oncogenes Pim-1, Pim-2, and c-Myc; and the transcription factors Mum1/IRF4 and Oct-2. In the group of PCFCCL high expression of SPINK2 was observed. Further analysis suggested that PCFCCLs and PCLBCLs-leg have expression profiles similar to that of germinal center B-cell–like and activated B-cell–like diffuse large B-cell lymphoma, respectively. The results of this study suggest that different pathogenetic mechanisms are involved in the development of PCFCCLs and PCLBCLs-leg and provide molecular support for the subdivision used in the EORTC classification.


Haematologica ◽  
2017 ◽  
Vol 102 (10) ◽  
pp. e404-e406 ◽  
Author(s):  
Jean-Philippe Jais ◽  
Thierry Jo Molina ◽  
Philippe Ruminy ◽  
David Gentien ◽  
Cecile Reyes ◽  
...  

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