Preparation of Mammalian Nascent RNA for Long Read Sequencing

Kirsten A. Reimer; Karla M. Neugebauer

doi:10.1002/cpmb.128

Preparation of Mammalian Nascent RNA for Long Read Sequencing

Current Protocols in Molecular Biology ◽

10.1002/cpmb.128 ◽

2020 ◽

Vol 133 (1) ◽

Cited By ~ 1

Author(s):

Kirsten A. Reimer ◽

Karla M. Neugebauer

Keyword(s):

Long Read ◽

Nascent Rna

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Long-read sequencing of nascent RNA reveals coupling among RNA processing events

Genome Research ◽

10.1101/gr.232025.117 ◽

2018 ◽

Vol 28 (7) ◽

pp. 1008-1019 ◽

Cited By ~ 34

Author(s):

Lydia Herzel ◽

Korinna Straube ◽

Karla M. Neugebauer

Keyword(s):

Rna Processing ◽

Long Read ◽

Nascent Rna

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The NCTC 3000 project: development and optimization of DNA extraction methods for 3000 different bacterial strains suitable for long-read PacBio SMRT sequencing

10.26226/morressier.56d5ba27d462b80296c95fcb ◽

2016 ◽

Author(s):

Mohammed Fazal

Keyword(s):

Dna Extraction ◽

Extraction Methods ◽

Project Development ◽

Bacterial Strains ◽

Smrt Sequencing ◽

Long Read ◽

Dna Extraction Methods ◽

Pacbio Smrt Sequencing

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Filling the gap of short-read next generation sequencing in PGD by long-read approach

10.26226/morressier.5af300b2738ab10027aa98ef ◽

2018 ◽

Author(s):

Dona Ngar Yin Ho

Keyword(s):

Next Generation Sequencing ◽

Next Generation ◽

Short Read ◽

Long Read ◽

Generation Sequencing

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Faculty Opinions recommendation of Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1011526.180965 ◽

2003 ◽

Author(s):

Gabriele Varani

Keyword(s):

Small Molecules ◽

Nascent Rna

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Faculty Opinions recommendation of The interaction between sigma70 and the beta-flap of Escherichia coli RNA polymerase inhibits extension of nascent RNA during early elongation.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1024640.298801 ◽

2005 ◽

Author(s):

Regine Hengge

Keyword(s):

Escherichia Coli ◽

Rna Polymerase ◽

Nascent Rna

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Faculty Opinions recommendation of A model for the origin of protein synthesis as coreplicational scanning of nascent RNA.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1098876.555034 ◽

2008 ◽

Author(s):

Martin Gruebele

Keyword(s):

Protein Synthesis ◽

Origin Of Protein Synthesis ◽

Nascent Rna

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Faculty Opinions recommendation of Comprehensive transcriptome analysis using synthetic long-read sequencing reveals molecular co-association of distant splicing events.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.725503882.793524932 ◽

2016 ◽

Author(s):

Auinash Kalsotra

Keyword(s):

Transcriptome Analysis ◽

Long Read

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Faculty Opinions recommendation of Nascent RNA sequencing reveals distinct features in plant transcription.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.726838545.793526993 ◽

2017 ◽

Author(s):

Chentao Lin

Keyword(s):

Rna Sequencing ◽

Nascent Rna ◽

Distinct Features

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Faculty Opinions recommendation of MinION-based long-read sequencing and assembly extends the Caenorhabditis elegans reference genome.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.732346961.793543720 ◽

2018 ◽

Author(s):

Charles Baer

Keyword(s):

Caenorhabditis Elegans ◽

Reference Genome ◽

Long Read

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Faculty Opinions recommendation of Global analysis of nascent RNA reveals transcriptional pausing in terminal exons.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.9206959.9800057 ◽

2011 ◽

Author(s):

Andrea Barta

Keyword(s):

Global Analysis ◽

Transcriptional Pausing ◽

Nascent Rna

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