Automated assessment for Alzheimer's disease diagnosis from MRI images: Meta‐heuristic assisted deep learning model

Author(s):  
G. Stalin Babu ◽  
S. N. Tirumala Rao ◽  
R. Rajeswara Rao
2021 ◽  
Vol 2021 ◽  
pp. 1-13
Author(s):  
Juan Zhou ◽  
Linfeng Hu ◽  
Yu Jiang ◽  
Liyue Liu

Motivation. At present, the research methods for image genetics of Alzheimer’s disease based on machine learning are mainly divided into three steps: the first step is to preprocess the original image and gene information into digital signals that are easy to calculate; the second step is feature selection aiming at eliminating redundant signals and obtain representative features; and the third step is to build a learning model and predict the unknown data with regression or bivariate correlation analysis. This type of method requires manual extraction of feature single-nucleotide polymorphisms (SNPs), and the extraction process relies on empirical knowledge to a certain extent, such as linkage imbalance and gene function information in a group sparse model, which puts forward certain requirements for applicable scenarios and application personnel. To solve the problems of insufficient biological significance and large errors in the previous methods of association analysis and disease diagnosis, this paper presents a method of correlation analysis and disease diagnosis between SNP and region of interest (ROI) based on a deep learning model. It is a data-driven method, which has no obvious feature selection process. Results. The deep learning method adopted in this paper has no obvious feature extraction process relying on prior knowledge and model assumptions. From the results of correlation analysis between SNP and ROI, this method is complementary to other regression model methods in application scenarios. In order to improve the disease diagnosis performance of deep learning, we use the deep learning model to integrate SNP characteristics and ROI characteristics. The SNP feature, ROI feature, and SNP-ROI joint feature were input into the deep learning model and trained by cross-validation technique. The experimental results show that the SNP-ROI joint feature describes the information of the samples from different angles, which makes the diagnosis accuracy higher.


2021 ◽  
Vol 2021 ◽  
pp. 1-16
Author(s):  
Monika Sethi ◽  
Sachin Ahuja ◽  
Shalli Rani ◽  
Puneet Bawa ◽  
Atef Zaguia

Alzheimer’s disease (AD) is one of the most important causes of mortality in elderly people, and it is often challenging to use traditional manual procedures when diagnosing a disease in the early stages. The successful implementation of machine learning (ML) techniques has also shown their effectiveness and its reliability as one of the better options for an early diagnosis of AD. But the heterogeneous dimensions and composition of the disease data have undoubtedly made diagnostics more difficult, needing a sufficient model choice to overcome the difficulty. Therefore, in this paper, four different 2D and 3D convolutional neural network (CNN) frameworks based on Bayesian search optimization are proposed to develop an optimized deep learning model to predict the early onset of AD binary and ternary classification on magnetic resonance imaging (MRI) scans. Moreover, certain hyperparameters such as learning rate, optimizers, and hidden units are to be set and adjusted for the performance boosting of the deep learning model. Bayesian optimization enables to leverage advantage throughout the experiments: A persistent hyperparameter space testing provides not only the output but also about the nearest conclusions. In this way, the series of experiments needed to explore space can be substantially reduced. Finally, alongside the use of Bayesian approaches, long short-term memory (LSTM) through the process of augmentation has resulted in finding the better settings of the model that too in less iterations with an relative improvement (RI) of 7.03%, 12.19%, 10.80%, and 11.99% over the four systems optimized with manual hyperparameters tuning such that hyperparameters that look more appealing from past data as well as the conventional techniques of manual selection.


IEEE Access ◽  
2019 ◽  
Vol 7 ◽  
pp. 63605-63618 ◽  
Author(s):  
Chiyu Feng ◽  
Ahmed Elazab ◽  
Peng Yang ◽  
Tianfu Wang ◽  
Feng Zhou ◽  
...  

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